Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20angularis_20[refseq_20GCF_5F001190045.1_202015-07-31] 37,375 sequences; 467,300,602 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 >seq1 Length=42234885 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| || |||||||| || || |||||||| |||| ||| | Sbjct 37706947 AATGCAAATTTTTGTAAAGACGTTGACTGGAAAGACCATTACTTTGGAGGTTGAAAGCTC 37706888 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | ||||| ||| ||| |||||||| || |||| || || Sbjct 37706887 TGATACCATTGATAATGTAAAGGCAAAGATTCAGGACAAAGAGGGGATTCCACCAGACCA 37706828 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||||||||||| | ||| || || || |||||||| ||| | || |||||||| Sbjct 37706827 GCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATAA 37706768 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || |||||||| || || || |||||| | || || ||||| Sbjct 37706767 CATCCAGAAGGAATCTACTCTGCACTTGGTGTTGAGGCTTCGTGGTGG 37706720 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| |||||||| || |||||||| ||||| |||||| |||| ||| Sbjct 37703212 ATGCAAATCTTTGTCAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 37703153 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| || ||| || || || || ||||| |||||| Sbjct 37703152 GATACCATTGATAATGTCAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCCGATCAG 37703093 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||| | ||| || ||||| | |||||| | ||| | || ||||||||| Sbjct 37703092 CAGAGGCTTATCTTTGCTGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATAAT 37703033 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || || || || ||||| | || || || ||| | || || ||||||| Sbjct 37703032 ATCCAGAAGGAGTCTACTTTGCACTTGGTTTTGAGGCTTCGAGGTGGCA 37702984 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||||||||| || ||||| || || ||||| ||| ||||| ||| Sbjct 37712651 ATGCAAATTTTTGTCAAGACTTTGACAGGAAAGACCATAACCTTGGAAGTGGAGAGTTCA 37712592 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || ||| ||| ||| || || || || | ||| ||||| Sbjct 37712591 GATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGATCAG 37712532 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||| | ||| || ||||| | ||||| | || | || |||||||| Sbjct 37712531 CAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGACGGAAGGACCCTTGCGGATTATAAC 37712472 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 ||||| || ||||| || || || || || ||| | || || ||||||| Sbjct 37712471 ATACAGAAGGAATCCACTCTGCACTTGGTTTTGAGGCTTCGTGGTGGCA 37712423 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| |||||||| || || |||| || |||||||||||| |||| |||| | Sbjct 37712423 ATGCAGATTTTTGTGAAGACTCTGACAGGGAAAACCATTACCTTGGAGGTGGAAAGCTCT 37712364 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || || ||| ||| ||||| || ||| | || ||||| Sbjct 37712363 GATACAATTGATAATGTGAAGACAAAGATTCAGGACAAGGAGGGCATCCCACCAGATCAG 37712304 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||||| ||| || || |||||||||||| | || |||| || || || Sbjct 37712303 CAGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGACTACAAC 37712244 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || |||||||| || || || | || | || || || |||||| Sbjct 37712243 ATTCAGAAAGAATCCACCCTTCACCTTGTCCTTCGCCTTCGTGGTGGC 37712196 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || |||| || || ||||||||| |||| ||| | Sbjct 37706719 AATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTC 37706660 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || ||| ||| ||| ||||| || ||| |||| ||||| Sbjct 37706659 TGATACAATTGATAATGTGAAAGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGATCA 37706600 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || |||||||||| ||| || ||||||||||||||| | || |||| || || || Sbjct 37706599 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 37706540 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || || ||||| || || || | || | || || || |||||| Sbjct 37706539 CATTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGCCTTCGTGGTGGC 37706491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421619061703000