Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq1091 1590 0.0 >seq1091 Length=1130 Score = 1590 bits (1762), Expect = 0.0 Identities = 1029/1126 (91%), Gaps = 1/1126 (0%) Strand=Plus/Plus Query 24959 ATTGTTGCCGTTGTGTGTTAGTTAACAGCAATAT-TTTTCCCCGGTGCTGGGCAGCTTTA 25017 |||||| |||||||||| | | || |||| | ||||||| |||| ||| | || || Sbjct 5 ATTGTTACCGTTGTGTGGTTGCTATTTACAATGTGTTTTCCCTGGTGTTGGTCTGCCTTG 64 Query 25018 TGCTGGTAtttttttATTTCCTTTTCATCGCTTCCAGTAATAAATCCTGTATTGCCCGTT 25077 | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 65 TACTGGTTTTTTTTTATTTCCTTTTCATCGCTTCCAGTAATAAATCCTGTATTTCCCGTT 124 Query 25078 TTGAATTGCGTCGTTCCATGACCACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAA 25137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 TTGAATTGCGTCGTTCCATGACCACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAA 184 Query 25138 TAAAGACAGGGCGGTTATGTCCGGCTTGTGCCTGACGAGTCGGGCCTATACGTTCGATAA 25197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 185 TAAAGACAGGGCGGTTATGTCCGGCTTGTGCCTGACGAGTCGGGCCTATACGTTCGATAA 244 Query 25198 TTTGCTGGTACTGCTCTAAATCCCACCAGTGGGaaaaaaaGACCAGAATATTACCGCCGT 25257 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 245 TTTGCTGGTACTGCTCTAAATCCCACCAATGGGAAAAAAAGACCAGAATATTACCGCCGT 304 Query 25258 CCTGTAAATTTAAGCCGTGTCCACAGCTTGCGGGGTGAGCAAAGAGCAAGGGGATTTTGC 25317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305 CCTGTAAATTTAAGCCGTGTCCACAGCTTGCGGGGTGAGCAAAGAGCAAGGGGATTTTGC 364 Query 25318 CATTATTCCAGTCGGTAAGGGTTCGGGGGTTGGCATCTAAATTTTTTCCTTTGGGAAAGG 25377 || ||||||||| || |||||| | |||||||| ||||| |||||||||| ||||| | Sbjct 365 CACTATTCCAGTTTGTGAGGGTTTGAGGGTTGGCGTCTAACATTTTTCCTTTTGGAAACG 424 Query 25378 CTTTTAATAAACGCTCGAGGTCATGTTTCCAGTGGTAAGCGACCAGTACTGGCGTCCCTC 25437 ||||||| | || || |||||||||||||||||||| || |||||||| ||| |||||| Sbjct 425 CTTTTAACAGTCGTTCAAGGTCATGTTTCCAGTGGTAGGCAACCAGTACGGGCATCCCTC 484 Query 25438 CTGATTCATTAACAATACTCTCTAGCGCCTGAATTTTGGCATCGTGTATCTCTGTCCAAT 25497 ||| |||||| |||||||| || || |||| |||||||||||||||||||||||||||| Sbjct 485 CTGCTTCATTGACAATACTTTCCAGTACCTGGATTTTGGCATCGTGTATCTCTGTCCAAT 544 Query 25498 TGCGATTGTCATCGCTATAAATAGCGCCACTGGCAATTTGCAAAATTTTTATTGTTTTGG 25557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 545 TGCGATTGTCATCGCTATAAATAGCGCCACTGGCAATTTGCAAAATTTTTATTGTTTTGG 604 Query 25558 CCGCCGCGTTTAACGCTTCAATCGCACTCTCGCCCAATTCAAGAAACAGTTCTTTTTCCA 25617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 605 CCGCCGCGTTTAACGCTTCAATCGCACTCTCGCCCAATTCAAGAAACAGTTCTTTTTCCA 664 Query 25618 TGGCATGATAGTGTGCTCGCGCTTTTGCAGGTAGTTCAACGTTGATAACGTTGTGTATCG 25677 | || ||||||||| |||||||||| | |||||||||| ||||||||||||||||| || Sbjct 665 TTGCTTGATAGTGTTCTCGCGCTTTAGTGGGTAGTTCAATGTTGATAACGTTGTGTACCG 724 Query 25678 GTTCATCGATATCAAACCAGTCGGCTGCATCAAGGGATAAGGTGACATCGCTAAGCGCTA 25737 |||| || ||||||||||||||||| |||| ||||||||| || ||||| || || ||| Sbjct 725 GTTCGTCAATATCAAACCAGTCGGCGGCATTAAGGGATAAAGTAACATCACTCAGAGCTG 784 Query 25738 ACGGAATTTGTAGATGCGCAAATCCTAAAGGCTCAAACCGACTCCATTGTTGCCCGGGCA 25797 || ||||||| ||||| ||||| |||||||||||||| ||||| |||||||| || | Sbjct 785 ACTGAATTTGAAGATGTGCAAAGGGTAAAGGCTCAAACCTGCTCCACTGTTGCCCTGGGA 844 Query 25798 ACTGGATACGCTTAAACCAGCGAGACGTAAACGCATTATAGGTTCTGCCTAAGCGCTCGC 25857 |||||||||| |||||||||||||||||||| || |||| | ||||||||||||| |||| Sbjct 845 ACTGGATACGGTTAAACCAGCGAGACGTAAATGCGTTATGGATTCTGCCTAAGCGTTCGC 904 Query 25858 CCTGGTCAACAAACCACGCTTGACCCCATAAGTCCATCAGGCCATTAGGTGAAGGCGTAC 25917 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | Sbjct 905 CCTGGTCAACAAACCACGCTTGCCCCCATAAGTCCATCAGGCCATTGGGTGAAGGCGTGC 964 Query 25918 CGGTCAGATTTACCCAGCGATGAACAGATTTATGCGCTATTTTGGCAAGTGCTGCGGTGC 25977 | ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 965 CCGTCAGGTTTACCCAGCGATGAACAGATTTATGCGCGATTTTGGCAAGTGCTGCGGTGC 1024 Query 25978 GTTTACCGCCTTTGCGTAACCGGAATGATTTCAACCGGGTGCTCTCATCGGCAATAATTG 26037 |||||||||||||||||||||| |||||||| || || |||||||||||||||||||||| Sbjct 1025 GTTTACCGCCTTTGCGTAACCGAAATGATTTTAAGCGTGTGCTCTCATCGGCAATAATTG 1084 Query 26038 TGCCAAAAGGCCAAGTGTCACCAAGTATGTCAACCAGCCAGACGAG 26083 |||||||||||||| |||| ||||| | ||||||||||||||||| Sbjct 1085 TGCCAAAAGGCCAACTGTCCCCAAGGACATCAACCAGCCAGACGAG 1130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116751735216468