Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1493 86.0 6e-12 >seq1493 Length=4971659 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || ||||||||||| || || || ||||||| | ||| ||||||||||| ||||| Sbjct 4757568 AGGCAAGCGAAGTCGCAGTGGAGACCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAAGTG 4757509 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATG-ACCCCGAAAA 16317 | |||||||| || |||||||| | ||| || || | |||||| | || || || Sbjct 4757508 AGTCCTGGCATGAGGCCCCGTTTCTTGAGCCAAAAGAT-GGAGCAAAAGCTTCCGGAGAA 4757450 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGA 16346 ||| || ||||| || | || || |||| Sbjct 4757449 GAAGATTCCCTCGACGCAGGCGAAGGCGA 4757421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511398424692680