Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq1091 188 2e-43 >seq1091 Length=1130 Score = 188 bits (208), Expect = 2e-43 Identities = 374/551 (68%), Gaps = 11/551 (2%) Strand=Plus/Minus Query 40304 ATTGAAGCATTCAATGCCGCCAGCAAGACCATAAAGTGCCTGCAACTCGCCAACGGCGCA 40363 |||||||| || || || || ||| || ||||| ||||| | |||| ||||| Sbjct 626 ATTGAAGCGTTAAACGCGGCGGCCAAAACAATAAAAATTTTGCAAATTGCCAGTGGCGCT 567 Query 40364 ATCTATACCGACGACACGGCGACCACCTGGGCCGATGTCCACGATGTCAAGCTACAGGCC 40423 || |||| ||| |||| || || ||| | || | ||||||| ||| | |||| Sbjct 566 ATTTATAGCGATGACAAT-CG--CAATTGGACAGAGATACACGATGCCAAAATCCAGGTA 510 Query 40424 CTTGAATCCATCGTCGCCGAGGCGGCCGGTATGCCGGTGCTGGTGGCGTACCACTTCAAG 40483 || ||| || ||| || || | || ||||| || ||||| || ||||||| || Sbjct 509 CTGGAAAGTATTGTCAATGAAGCAGGAGGGATGCCCGTACTGGTTGCCTACCACTGGAAA 450 Query 40484 TCCGACCTCGCGCGCCT----ACAGCGTGCCTTCCCCCAGGGCCGCGCGCTCGACCAGAA 40539 ||||| | || || | ||||| | || | || | | ||| || Sbjct 449 CATGACCTTGAACGACTGTTAAAAGCGT----TTCCAAAAGGAAAAATGTTAGACGCCAA 394 Query 40540 CCCGCAGACGATCCGCGACTGGAACGCAGGAAAAATCCCGCTGCTGTTCGCCCACCCGGC 40599 ||| || || || ||||||| || |||||||| |||| || || ||||| || Sbjct 393 CCCTCAAACCCTCACAAACTGGAATAGTGGCAAAATCCCCTTGCTCTTTGCTCACCCCGC 334 Query 40600 CAGCGCCGGCCACGGGCTGAACCTGCAAGACGGCGGCAACATCCTGGCTTTCTTCGGCCA 40659 ||| || ||||| | || | || |||||||| || || |||| || || ||| Sbjct 333 AAGCTGTGGACACGGCTTAAATTTACAGGACGGCGGTAATATTCTGGTCTTTTTTTCCCA 274 Query 40660 CTGGTGGGACTTGGAACAGTACCAGCAAATCATCGAACGTATCGGCCCGACGCGCCAGGC 40719 |||||||| || || |||||||||||||| ||||||||||| |||||||| || ||||| Sbjct 273 TTGGTGGGATTTAGAGCAGTACCAGCAAATTATCGAACGTATAGGCCCGACTCGTCAGGC 214 Query 40720 GCAGGCCGGCCATGACCGCCCGGTGTTCATCTACCACATTGTCGCCACCGACACGATGGA 40779 || ||||| ||| ||||||| || || || |||| || || || | || || | || Sbjct 213 ACAAGCCGGACATAACCGCCCTGTCTTTATTCACCATATCGTTGCTAAAGATACCCTCGA 154 Query 40780 CGAATTGGTCATGGCTCGCCGCGAGTCCAAGCGCGAGGTGCAAGACCTGCTACTGGAAGC 40839 ||| ||||||||| || ||| | || || || || | || || | |||||||||| Sbjct 153 TGAAGTGGTCATGGAACGACGCAATTCAAAACGGGAAATACAGGATTTATTACTGGAAGC 94 Query 40840 CATGAAAAGGA 40850 |||||||||| Sbjct 93 GATGAAAAGGA 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135851968388290