Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 1e-14 >seq7 Length=55601358 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| ||||||||||| || | ||| ||||||||| |||| ||||| || ||||| || Sbjct 49355452 ACAAGCAAAATCACAGTGAAGACCCTCATCCCTAGAGATTAGCTCATTTGAGAATGTCAA 49355393 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT 21583 ||| ||||||| |||||||||||| | ||| ||||| || ||| | ||| Sbjct 49355392 ACCTGGCATTAGTCCTCTCTTTTTAAGCCAGAATATGGA-GCAGAAGCT 49355345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531884184748760