Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq7 107 2e-18 >seq7 Length=55601358 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| || || |||||| | |||||| |||| | ||||| | Sbjct 47180287 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTCGAGGTGGAATCCTCC 47180228 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | ||||| ||||| ||||||||||| || ||||| ||||| Sbjct 47180227 GATACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAAGGAATCCCTCCGGATCAG 47180168 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| || || |||||||| || || | ||||| | | || || ||| Sbjct 47180167 CAGAGGCTGATTTTCGCTGGTAAACAACTTGAGGACGGTAGAACCCTTGCTGATTACAAC 47180108 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || || || || |||| |||| || Sbjct 47180107 ATTCAGAAGGAGTCCACGCTCCACTTGGTTCT 47180076 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || ||||| | |||||| | || | ||| Sbjct 37789131 ATGCAAATCTTTGTCAAGACCCTCACCGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 37789190 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | ||||| |||||| ||||| || || || || || || || Sbjct 37789191 GACACTATAGACAATGTCAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACCAG 37789250 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||| | | ||| || ||||| ||||||| ||| | | || |||||| Sbjct 37789251 CAGAGGCTCATATTTGCCGGAAAGCAACTAGAAGATGGCCGAACCTTGGCAGATTATAAC 37789310 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 ||||| ||||| || ||| ||||||| ||| || |||| Sbjct 37789311 ATTCAGAAAGAGTCAACTCTCCATCTTGTCTTGCGACT 37789348 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 26852 AAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAA 26911 ||||||| ||||| || || ||||| || |||||||| || || |||| | ||| || Sbjct 47191347 AAAGATTCAGGACAAGGAGGGCATACCACCAGATCAACAGAGGCTTATTTTTGCCGGGAA 47191288 Query 26912 ACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCA 26971 ||| | ||||||| | | | | | ||||| ||||||||||||||||| || | || Sbjct 47191287 GCAATTGGAAGATGGTCGTACCTTGGCAGACTACAACATTCAAAAAGAATCCACCCTTCA 47191228 Query 26972 TCTGGTCCT 26980 ||| ||||| Sbjct 47191227 TCTTGTCCT 47191219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478647447783280