Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_011551.1 Length=39867 Score E Sequences producing significant alignments: (Bits) Value seq1091 1532 0.0 >seq1091 Length=1130 Score = 1532 bits (1698), Expect = 0.0 Identities = 1016/1126 (90%), Gaps = 1/1126 (0%) Strand=Plus/Plus Query 27285 ATTGTTGCCGTTGTGTGTTAGTTAACAGCAATAT-TTTTCCCCGGTGCTGGGCAGCTTTA 27343 |||||| |||||||||| | | || |||| | ||||||| |||| ||| | || || Sbjct 5 ATTGTTACCGTTGTGTGGTTGCTATTTACAATGTGTTTTCCCTGGTGTTGGTCTGCCTTG 64 Query 27344 TGCTGGTAtttttttATTTCCTTTTCATCGCTTCCAGTAATAAATCCTGTATTGCCCGTT 27403 | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 65 TACTGGTTTTTTTTTATTTCCTTTTCATCGCTTCCAGTAATAAATCCTGTATTTCCCGTT 124 Query 27404 TTGAATTGCGTCGTTCCATGACCACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAA 27463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 TTGAATTGCGTCGTTCCATGACCACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAA 184 Query 27464 TAAAGACAGGGCGGTTATGTCCGGCTTGTGCCTGACGAGTCGGGCCGATACGTTCGATAA 27523 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 185 TAAAGACAGGGCGGTTATGTCCGGCTTGTGCCTGACGAGTCGGGCCTATACGTTCGATAA 244 Query 27524 TTTGCTGGTACTGCTCTAAGTCCCACCAGTGGGAGAAAAAGACCAGAATATTACCGCCGT 27583 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct 245 TTTGCTGGTACTGCTCTAAATCCCACCAATGGGAAAAAAAGACCAGAATATTACCGCCGT 304 Query 27584 CCTGTAAATTTAAGCCGTGTCCACAGCTTGCGGGGTGAGCAAAGAGCAAGGGGATTTTGC 27643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305 CCTGTAAATTTAAGCCGTGTCCACAGCTTGCGGGGTGAGCAAAGAGCAAGGGGATTTTGC 364 Query 27644 CACTATTCCAGTTTGTGAGGGTTTGGGGGTTAGCATCTAACATTTTTCCTTTTGGAAAGG 27703 ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| | Sbjct 365 CACTATTCCAGTTTGTGAGGGTTTGAGGGTTGGCGTCTAACATTTTTCCTTTTGGAAACG 424 Query 27704 CTTTTAATAAACGCTCCAGGTCATGTTTCCAGTGGTAAGCGACCAGTACTGGCGTCCCTC 27763 ||||||| | || || |||||||||||||||||||| || |||||||| ||| |||||| Sbjct 425 CTTTTAACAGTCGTTCAAGGTCATGTTTCCAGTGGTAGGCAACCAGTACGGGCATCCCTC 484 Query 27764 CTGATTCATTAACAATACTCTCTAGCGCCTGAATTTTGGCATCGTGTATCGCTGTCCAGT 27823 ||| |||||| |||||||| || || |||| |||||||||||||||||| ||||||| | Sbjct 485 CTGCTTCATTGACAATACTTTCCAGTACCTGGATTTTGGCATCGTGTATCTCTGTCCAAT 544 Query 27824 TGTGATTGTCATCGCTATAAATAGCGCCTGCTGCAATTTGTAAGGTTTTTATTGTTTTGG 27883 || ||||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct 545 TGCGATTGTCATCGCTATAAATAGCGCCACTGGCAATTTGCAAAATTTTTATTGTTTTGG 604 Query 27884 CCGCGGCATTTAACGCTTCAATAGCGCTATCGCCCAATTCAAGAAACAGTTCTTTTTCCA 27943 |||| || |||||||||||||| || || ||||||||||||||||||||||||||||||| Sbjct 605 CCGCCGCGTTTAACGCTTCAATCGCACTCTCGCCCAATTCAAGAAACAGTTCTTTTTCCA 664 Query 27944 TCGCCTGATAGTGCGCTCGCGCTTTTGCAGGTAGCGTAACGTTGATAACGTTGTGTATCG 28003 | || |||||||| |||||||||| | ||||| || ||||||||||||||||| || Sbjct 665 TTGCTTGATAGTGTTCTCGCGCTTTAGTGGGTAGTTCAATGTTGATAACGTTGTGTACCG 724 Query 28004 GTTCTTCGATATCAAACCAGTCGGCCGCATTAAGGGATAAGGTGACATCGCTAAGCGCTA 28063 |||| || ||||||||||||||||| |||||||||||||| || ||||| || || ||| Sbjct 725 GTTCGTCAATATCAAACCAGTCGGCGGCATTAAGGGATAAAGTAACATCACTCAGAGCTG 784 Query 28064 ACGGAATTTGTAGATGCGCAAATCCTAAAGGCTCAAACCGACTCCATTGTTGCCCGGGCA 28123 || ||||||| ||||| ||||| |||||||||||||| ||||| |||||||| || | Sbjct 785 ACTGAATTTGAAGATGTGCAAAGGGTAAAGGCTCAAACCTGCTCCACTGTTGCCCTGGGA 844 Query 28124 ACTGAATACGGTTAAACCAGCGAGACGTAAACGCATTATGGGTTCTGCCTAAGCGCTCGC 28183 |||| |||||||||||||||||||||||||| || |||||| ||||||||||||| |||| Sbjct 845 ACTGGATACGGTTAAACCAGCGAGACGTAAATGCGTTATGGATTCTGCCTAAGCGTTCGC 904 Query 28184 CCTGGTCAACAAACCACGCTTGCCCCCATAAGTCCATCAGGCCATTAGGTGAAGGCGTAC 28243 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 905 CCTGGTCAACAAACCACGCTTGCCCCCATAAGTCCATCAGGCCATTGGGTGAAGGCGTGC 964 Query 28244 CGGTCAGATTTACCCAGCGATGAACAGATTTATGCGCTATTTTGGCAATTGCTGCGGTGC 28303 | ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 965 CCGTCAGGTTTACCCAGCGATGAACAGATTTATGCGCGATTTTGGCAAGTGCTGCGGTGC 1024 Query 28304 GTTTACCGCCTTTGCGTAACCGGAATGATTTCAACCGAGTGCTCTCATCGGCAATAATTG 28363 |||||||||||||||||||||| |||||||| || || |||||||||||||||||||||| Sbjct 1025 GTTTACCGCCTTTGCGTAACCGAAATGATTTTAAGCGTGTGCTCTCATCGGCAATAATTG 1084 Query 28364 TGCCAAAAGGCCAAGTGTCACCAAGTATGTCAACCAGCCAGACGAG 28409 |||||||||||||| |||| ||||| | ||||||||||||||||| Sbjct 1085 TGCCAAAAGGCCAACTGTCCCCAAGGACATCAACCAGCCAGACGAG 1130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127449017758502