Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_012223.2 Length=44899 Score E Sequences producing significant alignments: (Bits) Value seq1091 100 8e-17 >seq1091 Length=1130 Score = 100 bits (110), Expect = 8e-17 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 28951 TAAACCAGCGATCCGTGAATGCCTTATAACTACTGCCGAGGCGTTCGCCCCCGTCGACAA 29010 ||||||||||| ||| ||||| |||| | ||||| | |||||||||| ||| |||| Sbjct 857 TAAACCAGCGAGACGTAAATGCGTTATGGATTCTGCCTAAGCGTTCGCCCTGGTCAACAA 916 Query 29011 ACCACGTCTGGCCCCATAGGTCTTTTAGTCCGTTTGGTGCGGGTGTGCCGGTCAGGTTAA 29070 |||||| || ||||||| ||| | || || || |||| || ||||| |||||||| | Sbjct 917 ACCACGCTTGCCCCCATAAGTCCATCAGGCCATTGGGTGAAGGCGTGCCCGTCAGGTTTA 976 Query 29071 TCCAGCGCTTGACGTGCTTATGTGCGAT 29098 |||||| | || ||||| ||||| Sbjct 977 CCCAGCGATGAACAGATTTATGCGCGAT 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143550939909718