Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_013599.1 Length=36674 Score E Sequences producing significant alignments: (Bits) Value seq1091 199 9e-47 >seq1091 Length=1130 Score = 199 bits (220), Expect = 9e-47 Identities = 217/288 (75%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 1871 TTTCACCGCTTCCAGCAGCAGGTCCTGTACTTCGCGTTTAGATTCACGGCGGGCCATCAC 1930 ||||| ||||||||| | | ||||||| ||| ||||| || | || || |||| || Sbjct 87 TTTCATCGCTTCCAGTAATAAATCCTGTATTTCCCGTTTTGAATTGCGTCGTTCCATGAC 146 Query 1931 CAATTCATCCACCGTGCCCGCCGCCACGATGTGGTGAATAAATACAGGCCGCTGATGTCC 1990 || |||||| | || | || ||||| ||||||||||| ||||| || | |||||| Sbjct 147 CACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAATAAAGACAGGGCGGTTATGTCC 206 Query 1991 GGCTTGCGCCTGACGTGTCGGCCCAATGCGTTCGATGATCTGCTGGTACTGCTCCAGGTC 2050 |||||| |||||||| ||||| || || |||||||| || |||||||||||||| | || Sbjct 207 GGCTTGTGCCTGACGAGTCGGGCCTATACGTTCGATAATTTGCTGGTACTGCTCTAAATC 266 Query 2051 CCACCAGTGGCCGAAGAAGGCCAAAATATTTCCGCCGTCTTGCAGATTTAAGCCATGACC 2110 |||||| ||| || ||| ||| |||||| |||||||| || | ||||||||| || || Sbjct 267 CCACCAATGGGAAAAAAAGACCAGAATATTACCGCCGTCCTGTAAATTTAAGCCGTGTCC 326 Query 2111 GGCACTGGCCGGATGGGCAAATAGCACGGGAATGTTCCCCGCATTCCA 2158 || || || || ||||| |||| ||| || || || |||||| Sbjct 327 ACAGCTTGCGGGGTGAGCAAAGAGCAAGGGGATTTTGCCACTATTCCA 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117231720972168