Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_019550.1 Length=38997 Score E Sequences producing significant alignments: (Bits) Value seq1091 84.2 5e-12 >seq1091 Length=1130 Score = 84.2 bits (92), Expect = 5e-12 Identities = 165/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 33709 TGATCTTGCTCGATTGCAAAAAGCATTTCCCCAAGGCCGAACGTTGGATAAAGACCCTTG 33768 ||| |||| ||| || |||||| ||||| |||| || ||| || ||||| Sbjct 447 TGACCTTGAACGACTGTTAAAAGCGTTTCCAAAAGGAAAAATGTTAGACGCCAACCCTCA 388 Query 33769 CACTATTCAAGAGTGGAATGAGGGGAAAATTCCTTTGTTGTTCGCACATCCAGCGTCTTG 33828 || | | | |||||| || ||||| || ||| | || || || || || || Sbjct 387 AACCCTCACAAACTGGAATAGTGGCAAAATCCCCTTGCTCTTTGCTCACCCCGCAAGCTG 328 Query 33829 TGGCCATGGCTTAAATCTCCAATATGGCGGGAACATTTTAGTCTTTTTCTCCTTGTGGTG 33888 ||| || ||||||||| | || | ||||| || ||| | |||||||| ||| ||||| Sbjct 327 TGGACACGGCTTAAATTTACAGGACGGCGGTAATATTCTGGTCTTTTTTTCCCATTGGTG 268 Query 33889 GGATTTAGAAGAACACCAACAGATGATTGAACGCATTGGGGTCACGCGTCAACGACAAGC 33948 ||||||||| | |||| || || || ||||| || || || ||||| |||||| Sbjct 267 GGATTTAGAGCAGTACCAGCAAATTATCGAACGTATAGGCCCGACTCGTCAGGCACAAGC 208 Query 33949 GGGA 33952 ||| Sbjct 207 CGGA 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124665100375442