Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_021794.1 Length=71443 Score E Sequences producing significant alignments: (Bits) Value seq1107 107 9e-19 >seq1107 Length=1307 Score = 107 bits (118), Expect = 9e-19 Identities = 195/283 (69%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 14971 TTTGCTTGCGGTGGTGGTTCTACAATGGGTTATAAACTTGCAGGTTTTGACGTTATTGGG 15030 |||| ||| || |||||||| || |||||||| ||| | ||||| |||||| | | ||| Sbjct 293 TTTGTTTGTGGGGGTGGTTCCACCATGGGTTACAAATTGGCAGGATTTGACCATCT-GGG 351 Query 15031 ATGAAT-GAAATCGACCCTAAAATGGCTGATTGCTACATTGAAAACCATAATCCTAAATA 15089 | | | ||||| ||||| ||||| ||| | |||||| |||| || || || ||||| Sbjct 352 AGGCGTCGAAATAGACCCGAAAATTGCTAAACTTTACATTAAAAATCACAACCCAAAATA 411 Query 15090 CTCTTATGTTGAAGATATACGAACTTTTAAAGATAGAACAGACCTACCCAAAGAACTTTA 15149 | |||| || || | || || || | | | ||||| || | ||||||||| Sbjct 412 TTTTTATCCGGAGGACGTTCGGGACTTCAATAAACGTAATGACCTCCCTACAGAACTTTA 471 Query 15150 TGATTTAGATATTTTGGATGGCTCTCCTCCTTGCAGTAGTTTTAGTATGGCTGGAAATCG 15209 |||||| ||||| || || || || || ||||| | | ||| |||| |||| || | Sbjct 472 TGATTTGGATATATTAGACGGTTCACCGCCTTGTACGACTTTCTCTATGACTGGCAAAAG 531 Query 15210 TGAAAAAGATTGGGGAAAAGAAAAGAAGTTTAGAGAAGGACAA 15252 || | ||||| | ||||| |||| | || |||||| Sbjct 532 AGAGCAGACGTGGGGTGTAAAAAAGCTGTTTCGGGAGGGACAA 574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228485840894756