Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 2e-15 >seq7 Length=55601358 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | ||||| || || ||||| | || ||||| | | Sbjct 47183956 TGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAAGTAGAGAGTTCTG 47183897 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || ||| || || ||||||||||| ||||| | Sbjct 47183896 ATACAATTGATAATGTGAAAGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGATCAGC 47183837 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || |||||||| || |||||||| || ||| | | || || |||| || || | Sbjct 47183836 AAAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAACA 47183777 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | || || ||||| || |||| Sbjct 47183776 TTCAGAAGGAATCCACCCTCCA 47183755 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | ||||| ||||||||||| | || || ||| | Sbjct 47191429 TGCAGATATTTGTGAAGACTCTGACAGGGAAAACAATTACCTTGGAGGTGGAAAGCTCTG 47191370 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || | || || || || || ||||| ||||| ||||||| Sbjct 47191369 ATACAATTGATAATGTGAAGACAAAGATTCAGGACAAGGAGGGCATACCACCAGATCAAC 47191310 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || ||||| || ||| | | || || |||| || || | Sbjct 47191309 AGAGGCTTATTTTTGCCGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGACTACAACA 47191250 Query 146212 TACAAAAAGAATCGAC 146227 | ||||||||||| || Sbjct 47191249 TTCAAAAAGAATCCAC 47191234 Score = 89.7 bits (98), Expect = 8e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | ||||| || || ||||| | || ||||| | Sbjct 48398578 TGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTAGAGAGCTCTG 48398519 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| ||||| ||| || || ||||||||||| ||||| | Sbjct 48398518 ATACAATTGATAATGTGAAAGCAAAAATTCAAGACAAGGAGGGCATTCCACCAGATCAGC 48398459 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || |||||||| || ||| | | || || |||| || || | Sbjct 48398458 AGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAACA 48398399 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | || || || || || |||| Sbjct 48398398 TTCAGAAGGAGTCCACCCTCCA 48398377 Score = 87.8 bits (96), Expect = 3e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || || ||||| ||||| | || || || | | Sbjct 47180058 TGCAAATCTTTGTCAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCAG 47179999 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| || || || ||| || || ||||| || ||||| | Sbjct 47179998 ATACCATTGATAATGTCAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGATCAGC 47179939 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||| || |||||| | || ||| ||||| | | |||||||||| Sbjct 47179938 AGAGGCTTATCTTTGCTGGGAAACAACTTGAAGATGGAAGAACCCTTGCGGATTATAATA 47179879 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | || ||||| || ||| | || || || || Sbjct 47179878 TCCAGAAAGAGTCCACTTTGCACTTGGTTTT 47179848 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 ||||||| ||| | || || | || || || || || ||| | || ||||| | | | Sbjct 37788676 TGCAAATCTTCGTTAAGACTCTCACCGGTAAGACCATCACTCTCGAAGTAGAGAGCTCA- 37788734 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | ||||| ||| || || ||| || ||||| || ||||| || || Sbjct 37788735 GATACCATTGATAATGTGAAAGCCAAGATTCAAGACAAGGAAGGAATCCCACCGGACCAG 37788794 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | ||||||||||| || ||||| | || ||| | | || | | ||||| || Sbjct 37788795 CAACGTCTCATTTTTGCTGGCAAACAGCTTGAGGATGGTCGTACCCTTGCTGATTACAAC 37788854 Query 146211 ATACAAAAAGAATCGACTATCCA 146233 || ||||| ||||| ||| |||| Sbjct 37788855 ATCCAAAAGGAATCCACTCTCCA 37788877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786141842127080