Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq7 95.1 1e-14 seq591 84.2 2e-11 >seq7 Length=55601358 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | || | ||| | | | || |||||||||||||||||||| || ||| Sbjct 47191209 ACGAAGGCGAAGGACAAGATGAAGGGTGGATTCTTTTTGAATGTTGTAGTCTGCCAAGGT 47191268 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| | || || |||| | | || || | |||||||||||| |||||||| Sbjct 47191269 ACGACCATCTTCCAATTGCTTCCCGGCAAAAATAAGCCTCTGTTGATCTGGTGGTATGCC 47191328 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || ||| ||| |||| | || | ||||| | ||||| || | Sbjct 47191329 CTCCTTGTCCTGAATCTTTGTCTTCACATTATCAATTGTATCAGAGCTTTCCACCTCCAA 47191388 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| || |||||||| || | || |||||||| Sbjct 47191389 GGTAATTGTTTTCCCTGTCAGAGTCTTCACAAATATCTGCAT 47191430 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || ||||| ||||| ||| | ||| | | ||| || Sbjct 17087158 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTTCTCCCATCCTCA 17087099 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||||||||| | | | || || | ||||||||| ||||| ||||| ||||| || Sbjct 17087098 AGCTGTTTACCAGCAAAAATAAGCCTCTGTTGATCCGGAGGGATGCCCTCTTTGTCTTGG 17087039 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | ||||| | |||||| || | || | ||||| Sbjct 17087038 ATTTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTT 17086979 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| ||| || | ||||||||||| Sbjct 17086978 CCAGTCAAAGTCTTCACAAAAATCTGCAT 17086950 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||||||||| || | | || ||||| || ||||| || || | ||| | || Sbjct 47191674 CAAAACCAAGTGCAAAGTGGATTCTTTCTGTATGTTATAATCCGCAAGGGTCCTTCCGTC 47191733 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| |||||||| |||| | |||| || | |||||||||||| ||||| || || ||||| Sbjct 47191734 TTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGTTGATCTGGGGGTATACCCTCCTTATC 47191793 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| ||| ||||| | || | ||||| | ||||||||| | || | || Sbjct 47191794 CTGAATCTTTGTTTTCACATTGTCAATTGTATCTGAACTCTCCACTTCCAAGGTTATGGT 47191853 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || |||| ||| || | ||||| ||||| Sbjct 47191854 CTTTCCTGTCAAAGTCTTGACAAAAATTTGCAT 47191886 >seq591 Length=869021 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | ||||||| |||||||| ||||| || | ||| | ||| || Sbjct 243431 ACCAAGTGGAGGGTTGACTCCTTTTGAATATTGTAATCAGCAAGGGTCCTTCCATCCTCA 243490 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || |||||||| | | | || || | ||||||||| ||||| ||||| ||||| || Sbjct 243491 AGTTGTTTACCAGCAAAAATAAGCCTCTGTTGATCCGGAGGGATGCCCTCTTTGTCTTGG 243550 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | ||||| | |||||| || | || | ||||| Sbjct 243551 ATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTT 243610 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| ||| |||| ||||||||||| Sbjct 243611 CCAGTCAAAGTCTTTACAAAAATCTGCAT 243639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476596311857640