Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20radiata_20var._20radiata_20[refseq_20GCF_5F000741045.1_20201 5-10-28] 2,499 sequences; 463,637,892 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 5e-16 >seq5 Length=37180910 Score = 98.7 bits (108), Expect = 5e-16 Identities = 145/199 (73%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAA-ATTAATATTGTTTGAACCAATAAAATT 65145 || || ||||| ||||||||||| |||| || ||| || ||||| ||| | ||||| Sbjct 26145345 CGAGTACCAAATTGACCATTTGGT-TTAAGAAGATTGATGTTGTTGCTACCCACAAAATC 26145287 Query 65146 CTGAGCCATTCCGATAATTGCTGC-ATTTAAACTCGCTTCACCGTGATGATATCCTGAAT 65204 || ||||| ||||||| ||| | |||||| ||||| ||||| || | |||| Sbjct 26145286 TTGTGCCATATTAATAATTG-TGCTAGATAAACTTTGCTCACCATGATGGTAAGCAGAAT 26145228 Query 65205 GTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAA 65264 | ||||| ||||| ||| |||| || || ||||||||||| | || ||||| |||| Sbjct 26145227 GCTCAGACACATAACCAATAAACTGGGCTACTTTTATTTCTTTGAACAATTTCTTCTTAA 26145168 Query 65265 ATG--CAGAATACAATATT 65281 ||| ||||| | ||| || Sbjct 26145167 ATGAACAGAACAGAATCTT 26145149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235672821997350