Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq76591 104 5e-17
seq58466 102 2e-16
seq44741 100 6e-16
seq76096 98.7 2e-15
seq14055 98.7 2e-15
seq53825 95.1 3e-14
seq42794 95.1 3e-14
seq3357 95.1 3e-14
seq222699 89.7 1e-12
seq73260 89.7 1e-12
seq67291 84.2 5e-11
>seq76591
Length=10161
Score = 104 bits (114), Expect = 5e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 3667 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3726
Query 165770 CCCACGATGGGC 165781
||||||||||||
Sbjct 3727 CCCACGATGGGC 3738
>seq58466
Length=13447
Score = 102 bits (112), Expect = 2e-16
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
|||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||
Sbjct 5791 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 5850
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 5851 GCCCCACGGTGGGC 5864
>seq44741
Length=8417
Score = 100 bits (110), Expect = 6e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766
|| |||||||||||||||| |||||||||| || || |||| || |||||||||||||||
Sbjct 2103 CTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 2162
Query 165767 AGCCCCACGATGGGC 165781
||||||||| |||||
Sbjct 2163 AGCCCCACGGTGGGC 2177
Score = 100 bits (110), Expect = 6e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766
|| |||||||||||||||| |||||||||| || || |||| || |||||||||||||||
Sbjct 4544 CTAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 4603
Query 165767 AGCCCCACGATGGGC 165781
||||||||| |||||
Sbjct 4604 AGCCCCACGGTGGGC 4618
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 8009 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 8068
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 8069 CCCCACGGTGGGC 8081
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 1956 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2015
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 2016 CCCACGGTGGGC 2027
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 4397 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4456
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 4457 CCCACGGTGGGC 4468
>seq76096
Length=1386
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 269 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 328
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 329 CCCACGGTGGGC 340
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||| ||||
Sbjct 1158 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTTGAGC 1217
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1218 CCCACGGTGGGC 1229
>seq14055
Length=7868
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 7376 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 7317
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 7316 CCCACGGTGGGC 7305
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||| ||||
Sbjct 5437 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTTGAGC 5378
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 5377 CCCACGGTGGGC 5366
>seq53825
Length=5318
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || |||||||||||||| |||
Sbjct 373 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCAAGC 314
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 313 CCCACGGTGGGC 302
>seq42794
Length=16633
Score = 95.1 bits (104), Expect = 3e-14
Identities = 63/70 (90%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 165712 CCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCC 165771
|||||||||||||| |||||||||| || || |||| || ||||||||||||||||||||
Sbjct 2722 CCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCC 2663
Query 165772 CACGATGGGC 165781
|||| |||||
Sbjct 2662 CACGGTGGGC 2653
>seq3357
Length=35635
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||| |||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 13180 GCCTGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13239
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 13240 CCCACGGTGGGC 13251
>seq222699
Length=2956
Score = 89.7 bits (98), Expect = 1e-12
Identities = 140/199 (70%), Gaps = 5/199 (3%)
Strand=Plus/Plus
Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810
||||| ||||||||||||||| ||| | || ||||| ||||||||||| || | ||
Sbjct 90 TCTGCATGTTCCCAATCCAATACCCCCAAATTTGGGAAATGTACAAGAAAGCCGAAGCCT 149
Query 229811 CTTTCTGGACCACTGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAAC 229870
||||||||||| | || || ||| ||| | |||| || | ||||| || |
Sbjct 150 CTTTCTGGACCGCCGAAGAGGTTGATCTTTCCCAAGACCTCCGCCACTGG---GACTCCC 206
Query 229871 TCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATG 229930
||| |||| ||| || | ||||||| ||| |||| | || || || | |||||| |
Sbjct 207 TCACCGACGGCGAGCGCTACTTCATCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACG 266
Query 229931 GTATTGTGATGGAAAATCT 229949
| || || | ||||| ||
Sbjct 267 GCATCGTTCTCGAAAACCT 285
>seq73260
Length=333
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || | |||| || |||||||||| |||||||
Sbjct 261 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGTTCTTAACCTTGTGGTCGTGGCTTCGAGC 202
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 201 CCCACGGTGGGC 190
>seq67291
Length=522
Score = 84.2 bits (92), Expect = 5e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || |||||||| |||| ||||
Sbjct 230 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTAGGTTTGAGC 289
Query 165770 CCCACGATGGG 165780
|| ||| ||||
Sbjct 290 CCTACGGTGGG 300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1054787570752050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |