Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq51459 82.4 6e-11 >seq51459 Length=25718 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061 ||||||||||| |||| || |||||||| || ||| | || ||| |||| | ||| ||| Sbjct 12167 CAGTTTTACGTAGCAAGTGGGGAATTATCGTGTCAAATGTATCAGCGATCTGCGGACATG 12226 Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121 ||||| ||||| || || || ||||| ||||| || || || | ||| | || ||| Sbjct 12227 GGCCTGGGGGTGCCATTTAATATTGCATCTTATGCTCTCCTGACATGCATGATTGCTCAT 12286 Query 19122 GTT 19124 ||| Sbjct 12287 GTT 12289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398413183666575