Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq88322 100 6e-16
seq65218 91.5 3e-13
>seq88322
Length=2502
Score = 100 bits (110), Expect = 6e-16
Identities = 118/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842
||||| ||| ||| ||| | || || || || || |||| |||| |||||||| |
Sbjct 659 TGGACAGCGAGATAATCTATGACAGGGACTTCGACTATGATTATTTTGGGTTCAAAACCC 718
Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902
| |||| || || ||| | || || | || ||| | |||||| | || |||||||
Sbjct 719 TTGAGAGGTCTTACCTCTTGAAGGTTCAAGGGAAGGTTGTGGAAAGGCCGCAACACATGT 778
Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGA 248942
||||| |||| || || |||||||||||||||||||||||
Sbjct 779 TGATGAGAGTCGCGGTTGGGATTCACAAGGATGACATAGA 818
>seq65218
Length=5182
Score = 91.5 bits (100), Expect = 3e-13
Identities = 86/107 (80%), Gaps = 2/107 (2%)
Strand=Plus/Minus
Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317
|||||| |||| | ||||| |||||||||||||| ||||| || ||||||| |||||
Sbjct 118 GTACTCCCCCACGCGCTTCTCGAAAAAGTTGGTCTTCCCCTGCAGGGAAATCAGCTCCAT 59
Query 157318 CCACTCGAATGGGTTG-GCGCAGTTGTACACCTTGTCGTACCCCAGC 157363
||| ||||| ||||| || || ||||||||||| || |||| |||
Sbjct 58 CCAATCGAACGGGTTCTGCACA-TTGTACACCTTCCCGCACCCAAGC 13
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1070684208914880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |