Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq222699 205 8e-48 seq205188 178 1e-39 seq39107 89.7 5e-13 seq44648 87.8 2e-12 >seq222699 Length=2956 Score = 205 bits (226), Expect = 8e-48 Identities = 581/882 (66%), Gaps = 27/882 (3%) Strand=Plus/Plus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| || || |||| || | |||||| | |||||||| || || ||||| || || Sbjct 94 CATGTTCCCAATCCAATACCCCCAAATTTGGGAAATGTACAAGAAAGCCGAAGCCTCTTT 153 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 ||||||| |||||| || || || || | || || || | ||||| ||||||| || Sbjct 154 CTGGACCGCCGAAGAGGTTGATCTTTCCCAAGACCTCCGCCACTGGGACTCCCTCACCGA 213 Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724 ||| | | || || | ||||| | || || || ||||| ||||| || || || Sbjct 214 CGGCGAGCGCTACTTCATCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGT 273 Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTT 57784 | ||| || | | || | || | ||| | |||| | ||||| | ||||| Sbjct 274 TCTCGAAAACCTCGCCGCCCGCTTCATGAAGGAAATCCAAGCCGCCGAGGCCCG-TGCTT 332 Query 57785 T-TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCG 57843 | ||||| || || | ||||| || ||| | || || || ||||| || ||| | | Sbjct 333 TCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGTCTCCTCTTGG 392 Query 57844 ATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGC 57903 | || ||| | || ||| | ||| || | |||||| ||| | || || || | Sbjct 393 AAACCTACATCAAAGACTCCACCGAAAAGAATCACCTGTTCCGCGCCGTAGATACCATCC 452 Query 57904 CCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGT 57963 || ||||||||||||| | ||| | | ||||| | ||||| | | | | Sbjct 453 CCTGTGTCGCCAAGAAGGCCCAATGGGCCTTGCGCTGGATCGAT---GCCACCGACTCCT 509 Query 57964 TCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-T 58022 | |||||| | || |||| |||||| |||||| || || ||||| || |||||||| | Sbjct 510 TTGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGCAGCTTCT 569 Query 58023 GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082 || | ||||||||| | ||||| |||||| ||||||||||||| || || |||||| Sbjct 570 GCT-CGATATTTTGGCTAAAGAAGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAACGAA 628 Query 58083 TTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATT 58142 | |||||||| || || || || || || || |||||||| ||||||||| | | Sbjct 629 CTCATATCGCGAGATGAAGGGCTTCACTGCGACTTCGCGTGCCTCTTGTACTCTCTCCTC 688 Query 58143 GTCAATAA----ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGAT 58198 | || |||||| || ||| | ||| ||| | ||| ||||| | || Sbjct 689 AGGAGGAAGCTCACCGAC----GAGCGCGTGAAGGAGATTGTGCGCGAAGCGGTTGACAT 744 Query 58199 CGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTT 58258 || | |||||||| ||| || || || || || | || |||||| || | Sbjct 745 AGAGAGAGAGTTTGTGTGCGACGCGCTTCCCTGTGCGTTGGTGGGGATGAACGGGGAGCT 804 Query 58259 GAT--GTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAG 58316 || ||||| || |||||||||||||| ||| | ||||| | | ||||| | Sbjct 805 AATGAGTCAA--TATATTGAGTTTGTTGCGGAC---CGGTTGCTGGGTGCGCTTGGA-TG 858 Query 58317 CGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGG 58372 || | ||| | ||||| ||||| | ||| | || || || ||| |||| Sbjct 859 CGGGAAGGTGTACGGTGTTCAGAATCCCTTTGACTGGATGGAGCTTATATCTCTCCAGGG 918 Query 58373 CAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414 ||| || ||||| || ||||| ||| | || ||||| || Sbjct 919 CAAAACTAACTTCTTTGAAAAGCGCGTTGGGGACTATCAGAA 960 >seq205188 Length=846 Score = 178 bits (196), Expect = 1e-39 Identities = 378/564 (67%), Gaps = 3/564 (1%) Strand=Plus/Minus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| || || |||| || | || ||| | |||||||| || |||||||| ||||| Sbjct 561 CATGTTCCCTATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTT 502 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 ||||| | || || || || || ||| |||| | ||| ||||| | | |||| || Sbjct 501 CTGGACGGCGGAGGAGGTCGATCTCTCTCAGGACATCAGCCATTGGAACACTCTCACCGA 442 Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724 ||| | |||| || | ||||| | || || |||||||| ||||| || || || Sbjct 441 CGGCGAGCGCCATTTCATCACCCACGTCCTTGCCTTCTTCGCCGCCTCCGACGGCATCGT 382 Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTT 57784 ||| || | | || | ||| | || || || || | ||||| | ||| Sbjct 381 ACTCGAAAACCTCGCCGGCCGTTTTATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGCCTT 322 Query 57785 TTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGA 57844 |||||| || || | ||||| || ||| | || || || ||||| || ||| |||| Sbjct 321 TTACGGCTTCCAGATCGCCATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGA 262 Query 57845 TACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCC 57904 || ||| | || ||| || |||||| | | || || |||| || || || || || Sbjct 261 AACCTACATAAAAGACTCCGTAGAGAAAAGCCGTCTCTTTCACGCCATTGACACCATTCC 202 Query 57905 CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTT 57964 | || |||||||||| | ||| | || ||||| | | | | | | | || Sbjct 201 CTGTGTCACCAAGAAGGCCAACTGGGCCCTCCGCTGGATCGA---CTCTTCCGACTCCTT 145 Query 57965 CGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGC 58024 ||||||| | | |||| || ||| ||| || || || ||||| || || |||||| Sbjct 144 CGCCGAGCGCATCGTCGCATTTGCCTGCGTTGAGGGAATCTTCTTCTCCGGAAGCTTTTG 85 Query 58025 GGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTT 58084 | || || ||| | |||||||| ||||| ||||| || || || || |||||| | Sbjct 84 CTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACCTTCTCCAACGAACT 25 Query 58085 GATATCGCGCGACGAGGGTCTCCA 58108 || || ||||||||||||||||| Sbjct 24 CATCTCCCGCGACGAGGGTCTCCA 1 >seq39107 Length=55737 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || ||||||||||| || ||||| || || | || |||||| || Sbjct 16778 CATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTC 16837 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | | || | || || || || ||| |||||| || || | || || |||| Sbjct 16838 TGATACCATTGACAATGTAAAGGCAAAG-ATACAGGACAAAGAGGGTATTCCACCAGACC 16896 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||| | || || || ||||| || ||| ||||||| || | ||||||| Sbjct 16897 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGTACACTTGCTGATTATA 16956 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||| || || ||||| ||||||||| |||| Sbjct 16957 ACATCCAGAAGGAATCCACTCTTCATTTGGT 16987 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || ||||||||||| || ||||| || || | || |||||| || Sbjct 26552 CATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTC 26611 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | | || | || || || || ||| |||||| || || | || || |||| Sbjct 26612 TGATACCATTGACAATGTAAAGGCAAAG-ATACAGGACAAAGAGGGTATTCCACCAGACC 26670 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||| | || || || ||||| || ||| ||||||| || | ||||||| Sbjct 26671 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATA 26730 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||| || || ||||| ||||| || ||||| Sbjct 26731 ACATCCAGAAGGAATCTACTCTGCACCTGGT 26761 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || ||||||||||| || ||||| || || | || |||||| || Sbjct 41389 CATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTC 41448 Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | | || | || || || || ||| |||||| || || | || || |||| Sbjct 41449 TGATACCATTGACAATGTAAAGGCAAAG-ATACAGGACAAAGAGGGTATTCCACCAGACC 41507 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||| | || || || ||||| || ||| ||||||| || | ||||||| Sbjct 41508 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATA 41567 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||| || || ||||| ||||| || ||||| Sbjct 41568 ACATCCAGAAGGAATCTACTCTGCACCTGGT 41598 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||||||||| || || || ||| | || || || || Sbjct 26781 ATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTCT 26840 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || ||| || || || ||||||||| ||| | || || || || Sbjct 26841 GATACAATTGATAATGTGAAAGCAAAG-ATTCAGGACAAGGAGGGCATTCCACCAGATCA 26899 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| ||||| |||||||| | || || || || || Sbjct 26900 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 26959 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||| || ||||| || || || || || ||| Sbjct 26960 CATTCAGAAGGAATCCACCCTCCACCTTGTCCTT 26993 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||||||||| || || || ||| | || || || || Sbjct 41618 ATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTCT 41677 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || ||| || || || ||||||||| ||| | || || || || Sbjct 41678 GATACAATTGATAATGTGAAAGCAAAG-ATTCAGGACAAGGAGGGCATTCCACCAGATCA 41736 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| ||||| |||||||| | || || || || || Sbjct 41737 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 41796 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||| || ||||| || || || || || ||| Sbjct 41797 CATTCAGAAGGAATCCACCCTCCACCTTGTCCTT 41830 >seq44648 Length=6574 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||||| || || ||||| || || | || || || || Sbjct 5311 ATGCAGATTTTTGTCAAGACTCTTACTGGAAAAACTATTACTTTGGAGGTCGAGAGTTCA 5370 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || || ||| || ||||||||| ||| | || || || || Sbjct 5371 GACACGATTGACAATGTGAAGGCAAAGA-TACAGGACAAGGAGGGCATTCCTCCAGATCA 5429 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||| | | || || ||||| || ||| | || || | | | ||| || ||||| | Sbjct 5430 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGA-TGGACGTACTCTGGCTGATTACA 5488 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||||| || || || ||||||||||| || ||| | |||||||| || Sbjct 5489 ACATTCAGAAGGAGTCCACTCTTCATCTTGTCCTTCGCCTGAGGGGAGG 5537 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| | ||||| || || || || | || |||||| || Sbjct 5539 ATGCAGATCTTTGTGAAGACTTTAACAGGAAAGACTATAACTTTGGAGGTTGAAAGCTCA 5598 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | ||| |||||||||||| | || || || ||| Sbjct 5599 GATACAATTGATAACGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCACCAGATCAG 5658 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| || || ||||| || || |||| | ||||| ||| Sbjct 5659 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGTAGGACTCTTGCTGATTACAAC 5718 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 ||||| ||||| || || ||||| || ||| Sbjct 5719 ATTCAGAAAGAGTCCACCCTTCACCTCGTA 5748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444518059057200