Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq222699 205 8e-48
seq205188 178 1e-39
seq39107 89.7 5e-13
seq44648 87.8 2e-12
>seq222699
Length=2956
Score = 205 bits (226), Expect = 8e-48
Identities = 581/882 (66%), Gaps = 27/882 (3%)
Strand=Plus/Plus
Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604
|||||| || || |||| || | |||||| | |||||||| || || ||||| || ||
Sbjct 94 CATGTTCCCAATCCAATACCCCCAAATTTGGGAAATGTACAAGAAAGCCGAAGCCTCTTT 153
Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664
||||||| |||||| || || || || | || || || | ||||| ||||||| ||
Sbjct 154 CTGGACCGCCGAAGAGGTTGATCTTTCCCAAGACCTCCGCCACTGGGACTCCCTCACCGA 213
Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724
||| | | || || | ||||| | || || || ||||| ||||| || || ||
Sbjct 214 CGGCGAGCGCTACTTCATCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGT 273
Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTT 57784
| ||| || | | || | || | ||| | |||| | ||||| | |||||
Sbjct 274 TCTCGAAAACCTCGCCGCCCGCTTCATGAAGGAAATCCAAGCCGCCGAGGCCCG-TGCTT 332
Query 57785 T-TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCG 57843
| ||||| || || | ||||| || ||| | || || || ||||| || ||| | |
Sbjct 333 TCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGTCTCCTCTTGG 392
Query 57844 ATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGC 57903
| || ||| | || ||| | ||| || | |||||| ||| | || || || |
Sbjct 393 AAACCTACATCAAAGACTCCACCGAAAAGAATCACCTGTTCCGCGCCGTAGATACCATCC 452
Query 57904 CCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGT 57963
|| ||||||||||||| | ||| | | ||||| | ||||| | | | |
Sbjct 453 CCTGTGTCGCCAAGAAGGCCCAATGGGCCTTGCGCTGGATCGAT---GCCACCGACTCCT 509
Query 57964 TCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-T 58022
| |||||| | || |||| |||||| |||||| || || ||||| || |||||||| |
Sbjct 510 TTGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGCAGCTTCT 569
Query 58023 GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082
|| | ||||||||| | ||||| |||||| ||||||||||||| || || ||||||
Sbjct 570 GCT-CGATATTTTGGCTAAAGAAGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAACGAA 628
Query 58083 TTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATT 58142
| |||||||| || || || || || || || |||||||| ||||||||| | |
Sbjct 629 CTCATATCGCGAGATGAAGGGCTTCACTGCGACTTCGCGTGCCTCTTGTACTCTCTCCTC 688
Query 58143 GTCAATAA----ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGAT 58198
| || |||||| || ||| | ||| ||| | ||| ||||| | ||
Sbjct 689 AGGAGGAAGCTCACCGAC----GAGCGCGTGAAGGAGATTGTGCGCGAAGCGGTTGACAT 744
Query 58199 CGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTT 58258
|| | |||||||| ||| || || || || || | || |||||| || |
Sbjct 745 AGAGAGAGAGTTTGTGTGCGACGCGCTTCCCTGTGCGTTGGTGGGGATGAACGGGGAGCT 804
Query 58259 GAT--GTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAG 58316
|| ||||| || |||||||||||||| ||| | ||||| | | ||||| |
Sbjct 805 AATGAGTCAA--TATATTGAGTTTGTTGCGGAC---CGGTTGCTGGGTGCGCTTGGA-TG 858
Query 58317 CGTCA----TTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGG 58372
|| | ||| | ||||| ||||| | ||| | || || || ||| ||||
Sbjct 859 CGGGAAGGTGTACGGTGTTCAGAATCCCTTTGACTGGATGGAGCTTATATCTCTCCAGGG 918
Query 58373 CAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
||| || ||||| || ||||| ||| | || ||||| ||
Sbjct 919 CAAAACTAACTTCTTTGAAAAGCGCGTTGGGGACTATCAGAA 960
>seq205188
Length=846
Score = 178 bits (196), Expect = 1e-39
Identities = 378/564 (67%), Gaps = 3/564 (1%)
Strand=Plus/Minus
Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604
|||||| || || |||| || | || ||| | |||||||| || |||||||| |||||
Sbjct 561 CATGTTCCCTATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTT 502
Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664
||||| | || || || || || ||| |||| | ||| ||||| | | |||| ||
Sbjct 501 CTGGACGGCGGAGGAGGTCGATCTCTCTCAGGACATCAGCCATTGGAACACTCTCACCGA 442
Query 57665 ATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGT 57724
||| | |||| || | ||||| | || || |||||||| ||||| || || ||
Sbjct 441 CGGCGAGCGCCATTTCATCACCCACGTCCTTGCCTTCTTCGCCGCCTCCGACGGCATCGT 382
Query 57725 TAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTT 57784
||| || | | || | ||| | || || || || | ||||| | |||
Sbjct 381 ACTCGAAAACCTCGCCGGCCGTTTTATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGCCTT 322
Query 57785 TTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGA 57844
|||||| || || | ||||| || ||| | || || || ||||| || ||| ||||
Sbjct 321 TTACGGCTTCCAGATCGCCATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGA 262
Query 57845 TACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCC 57904
|| ||| | || ||| || |||||| | | || || |||| || || || || ||
Sbjct 261 AACCTACATAAAAGACTCCGTAGAGAAAAGCCGTCTCTTTCACGCCATTGACACCATTCC 202
Query 57905 CGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTT 57964
| || |||||||||| | ||| | || ||||| | | | | | | | ||
Sbjct 201 CTGTGTCACCAAGAAGGCCAACTGGGCCCTCCGCTGGATCGA---CTCTTCCGACTCCTT 145
Query 57965 CGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGC 58024
||||||| | | |||| || ||| ||| || || || ||||| || || ||||||
Sbjct 144 CGCCGAGCGCATCGTCGCATTTGCCTGCGTTGAGGGAATCTTCTTCTCCGGAAGCTTTTG 85
Query 58025 GGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTT 58084
| || || ||| | |||||||| ||||| ||||| || || || || |||||| |
Sbjct 84 CTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACCTTCTCCAACGAACT 25
Query 58085 GATATCGCGCGACGAGGGTCTCCA 58108
|| || |||||||||||||||||
Sbjct 24 CATCTCCCGCGACGAGGGTCTCCA 1
>seq39107
Length=55737
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||||||||| || ||||||||||| || ||||| || || | || |||||| ||
Sbjct 16778 CATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTC 16837
Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|| | | || | || || || || ||| |||||| || || | || || ||||
Sbjct 16838 TGATACCATTGACAATGTAAAGGCAAAG-ATACAGGACAAAGAGGGTATTCCACCAGACC 16896
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||| | || || || ||||| || ||| ||||||| || | |||||||
Sbjct 16897 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGTACACTTGCTGATTATA 16956
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||| || || ||||| ||||||||| ||||
Sbjct 16957 ACATCCAGAAGGAATCCACTCTTCATTTGGT 16987
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||||||||| || ||||||||||| || ||||| || || | || |||||| ||
Sbjct 26552 CATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTC 26611
Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|| | | || | || || || || ||| |||||| || || | || || ||||
Sbjct 26612 TGATACCATTGACAATGTAAAGGCAAAG-ATACAGGACAAAGAGGGTATTCCACCAGACC 26670
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||| | || || || ||||| || ||| ||||||| || | |||||||
Sbjct 26671 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATA 26730
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||| || || ||||| ||||| || |||||
Sbjct 26731 ACATCCAGAAGGAATCTACTCTGCACCTGGT 26761
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||||||||| || ||||||||||| || ||||| || || | || |||||| ||
Sbjct 41389 CATGCAAATTTTTGTCAAGACTCTGACGGGAAAAACTATTACTTTGGAGGTTGAAAGTTC 41448
Query 31252 CGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|| | | || | || || || || ||| |||||| || || | || || ||||
Sbjct 41449 TGATACCATTGACAATGTAAAGGCAAAG-ATACAGGACAAAGAGGGTATTCCACCAGACC 41507
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||| | || || || ||||| || ||| ||||||| || | |||||||
Sbjct 41508 AGCAAAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGAACCCTTGCTGATTATA 41567
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|||| || || ||||| ||||| || |||||
Sbjct 41568 ACATCCAGAAGGAATCTACTCTGCACCTGGT 41598
Score = 82.4 bits (90), Expect = 7e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||||||||||| || || || ||| | || || || ||
Sbjct 26781 ATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTCT 26840
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | || | || ||| || || || ||||||||| ||| | || || || ||
Sbjct 26841 GATACAATTGATAATGTGAAAGCAAAG-ATTCAGGACAAGGAGGGCATTCCACCAGATCA 26899
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || ||||| ||||| |||||||| | || || || || ||
Sbjct 26900 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 26959
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|||||| || ||||| || || || || || |||
Sbjct 26960 CATTCAGAAGGAATCCACCCTCCACCTTGTCCTT 26993
Score = 82.4 bits (90), Expect = 7e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||||||||||| || || || ||| | || || || ||
Sbjct 41618 ATGCAGATATTTGTGAAGACTCTGACAGGAAAGACCATTACCTTGGAGGTGGAGAGCTCT 41677
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | || | || ||| || || || ||||||||| ||| | || || || ||
Sbjct 41678 GATACAATTGATAATGTGAAAGCAAAG-ATTCAGGACAAGGAGGGCATTCCACCAGATCA 41736
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || ||||| ||||| |||||||| | || || || || ||
Sbjct 41737 GCAGAGGCTTATTTTTGCTGGGAAACAATTGGAAGATGGTCGCACCTTGGCAGACTACAA 41796
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
|||||| || ||||| || || || || || |||
Sbjct 41797 CATTCAGAAGGAATCCACCCTCCACCTTGTCCTT 41830
>seq44648
Length=6574
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || |||||||| || || ||||| || || | || || || ||
Sbjct 5311 ATGCAGATTTTTGTCAAGACTCTTACTGGAAAAACTATTACTTTGGAGGTCGAGAGTTCA 5370
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || || ||| || ||||||||| ||| | || || || ||
Sbjct 5371 GACACGATTGACAATGTGAAGGCAAAGA-TACAGGACAAGGAGGGCATTCCTCCAGATCA 5429
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
||| | | || || ||||| || ||| | || || | | | ||| || ||||| |
Sbjct 5430 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGA-TGGACGTACTCTGGCTGATTACA 5488
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||||| || || || ||||||||||| || ||| | |||||||| ||
Sbjct 5489 ACATTCAGAAGGAGTCCACTCTTCATCTTGTCCTTCGCCTGAGGGGAGG 5537
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||| | ||||| || || || || | || |||||| ||
Sbjct 5539 ATGCAGATCTTTGTGAAGACTTTAACAGGAAAGACTATAACTTTGGAGGTTGAAAGCTCA 5598
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | ||||| | ||| |||||||||||| | || || || |||
Sbjct 5599 GATACAATTGATAACGTCAAGGCAAAAATCCAGGACAAGGAAGGAATCCCACCAGATCAG 5658
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || ||||| || || ||||| || || |||| | ||||| |||
Sbjct 5659 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGTAGGACTCTTGCTGATTACAAC 5718
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402
||||| ||||| || || ||||| || |||
Sbjct 5719 ATTCAGAAAGAGTCCACCCTTCACCTCGTA 5748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444518059057200
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