Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 109 5e-19
>seq39107
Length=55737
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
||||| | || ||||| | ||| ||||| ||||||||||| ||||| | || ||
Sbjct 26314 AAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTT 26255
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
||| || || ||||||||||| | |||| | |||||||| ||||| || ||||||
Sbjct 26254 CCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCT 26195
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | || || | || |||||||| | |||
Sbjct 26194 TTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTG 26135
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || || |||||||| ||||| ||||| ||||||||
Sbjct 26134 ATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 26097
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
||||| | || ||||| | ||| ||||| ||||||||||| ||||| | || ||
Sbjct 29637 AAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTT 29578
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
||| || || ||||||||||| | |||| | |||||||| ||||| || ||||||
Sbjct 29577 CCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCT 29518
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | || || | || |||||||| | |||
Sbjct 29517 TTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTG 29458
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || || |||||||| ||||| ||||| ||||||||
Sbjct 29457 ATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 29420
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
||||| | || ||||| | ||| ||||| ||||||||||| ||||| | || ||
Sbjct 46568 AAACGAAGCACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTT 46509
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
||| || || ||||||||||| | |||| | |||||||| ||||| || ||||||
Sbjct 46508 CCGTCCTCAAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCT 46449
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | || || | || |||||||| | |||
Sbjct 46448 TTGTCCTGGATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTG 46389
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || || |||||||| ||||| ||||| ||||||||
Sbjct 46388 ATAGTTTTTCCGGTCAAAGTTTTCACGAAGATTTGCAT 46351
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
||||| | || ||||| | ||| ||||| || ||||| || |||||| | || |||
Sbjct 41151 AAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTTCTC 41092
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
|| ||||| |||||||||||| | || | | ||| ||||| ||||| || || |||
Sbjct 41091 CCATCCTCGAGTTGTTTACCAGCAAAAATTAACCTTTGTTGATCCGGAGGGATACCCTCT 41032
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | ||||| | | || || |||| |||
Sbjct 41031 TTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCAGACGATTCTACTTCAAGGGTG 40972
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| |||||||| ||||| ||||| || || || |||||
Sbjct 40971 ATGGTCTTGCCAGTCAAAGTTTTCACAAAGATCTGCAT 40934
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611
|||||| ||||| | ||||| ||||| || ||||||||||| | || || ||
Sbjct 16763 CAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTATAATCCGCAAGGGTTCTTCCATC 16704
Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
||| |||||||| || ||| |||| || | ||||| || || || || || || || ||
Sbjct 16703 TTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATC 16644
Query 139672 GGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730
||| | || | |||| | | || | || || | ||||||||| | ||| | |
Sbjct 16643 -CTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATAG 16585
Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || |||||||| || || || || ||||||||
Sbjct 16584 TTTTCCCGGTCAAAGTCTTCACAAAGATTTGCAT 16551
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611
|||||| ||||| | ||||| ||||| || ||||||||||| | || || ||
Sbjct 26537 CAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTATAATCCGCAAGGGTTCTTCCATC 26478
Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
||| |||||||| || ||| |||| || | ||||| || || || || || || || ||
Sbjct 26477 TTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATC 26418
Query 139672 GGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730
||| | || | |||| | | || | || || | ||||||||| | ||| | |
Sbjct 26417 -CTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATAG 26359
Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || |||||||| || || || || ||||||||
Sbjct 26358 TTTTCCCGGTCAAAGTCTTCACAAAGATTTGCAT 26325
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611
|||||| ||||| | ||||| ||||| || ||||||||||| | || || ||
Sbjct 29860 CAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTATAATCCGCAAGGGTTCTTCCATC 29801
Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
||| |||||||| || ||| |||| || | ||||| || || || || || || || ||
Sbjct 29800 TTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATC 29741
Query 139672 GGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730
||| | || | |||| | | || | || || | ||||||||| | ||| | |
Sbjct 29740 -CTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATAG 29682
Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || |||||||| || || || || ||||||||
Sbjct 29681 TTTTCCCGGTCAAAGTCTTCACAAAGATTTGCAT 29648
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611
|||||| ||||| | ||||| ||||| || ||||||||||| | || || ||
Sbjct 46791 CAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTATAATCCGCAAGGGTTCTTCCATC 46732
Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
||| |||||||| || ||| |||| || | ||||| || || || || || || || ||
Sbjct 46731 TTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATC 46672
Query 139672 GGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730
||| | || | |||| | | || | || || | ||||||||| | ||| | |
Sbjct 46671 -CTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAATAG 46613
Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || |||||||| || || || || ||||||||
Sbjct 46612 TTTTCCCGGTCAAAGTCTTCACAAAGATTTGCAT 46579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494674803772000
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