Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq222699 141 1e-28
seq205188 141 1e-28
>seq222699
Length=2956
Score = 141 bits (156), Expect = 1e-28
Identities = 377/562 (67%), Gaps = 22/562 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
||||||||||||||||| || || | ||||| || ||||| | ||||||||| |||||
Sbjct 119 ATTTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGATCTT 178
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||| | ||||| | | ||||| | | | || || ||||| | || || |
Sbjct 179 TCCCAAGACCTCCGCCACTGGGACTCCC---TCACCGACGGCGAGCGCTACTTCATCACC 235
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | | ||||||||||||| |||||| || ||||| ||| || || | ||
Sbjct 236 CACGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGCCGCCCGC 295
Query 125199 TTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTT-TACGGATTCCAAATCATG 125255
||| | || | ||| || |||| |||||||| ||||| ||||| |||
Sbjct 296 TTCATGAAGGAAAT--CCAAGCCGCCGAGGCC-CGTGCTTTCTACGGCTTCCAGATCGCC 352
Query 125256 ATTGAGAACGTGCACTCGGAAATGTAC--TCTACACTGATTGACATGTACATTCGCGATC 125313
|| |||||| | ||||| || |||||| ||| | || | || | ||||| ||
Sbjct 353 ATCGAGAACATCCACTCCGAGATGTACAGTCTCCTCT--TGGAAACCTACATCAAAGACT 410
Query 125314 CGCAACGTAAACACATG--CTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371
| || || ||| | || || || ||| | || || | || | | | || ||
Sbjct 411 C-CACCGAAAAGA-ATCACCTGTTCCGCGCCGTAGATACCATCCCCTGTGTCGCCAAGAA 468
Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431
||| ||||||| | || |||||||||| | | | || | ||||| | || ||
Sbjct 469 GGCCCAATGGGCCTTGCGCTGGATCGATGCCACCGACTCCTTT---GCCGAGCGCCTCGT 525
Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTTTTGGC 125490
|| |||||| ||| ||||| |||||||| || || || || ||| | || |||||||
Sbjct 526 CGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGCAGCTTCTGCT-CGATATTTTGGC 584
Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550
| ||||||||||| | |||||||| || || | ||||| | ||||| ||||| |
Sbjct 585 TAAAGAAGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAACGAACTCATATCGCGAGATG 644
Query 125551 AGGGCCTACACTGTGACTTTGC 125572
| || || ||||| ||||| ||
Sbjct 645 AAGGGCTTCACTGCGACTTCGC 666
>seq205188
Length=846
Score = 141 bits (156), Expect = 1e-28
Identities = 372/551 (68%), Gaps = 24/551 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| |||||||||||||| || || | ||||| || ||||||| || |||||||||||
Sbjct 536 ATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTTCTGGACGGCGGAGGAGGTCGATCTC 477
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| | | ||||| | |||| | || || ||||| | || || |
Sbjct 476 TCTCAGGACATCAGCCATTGGAACACTC---TCACCGACGGCGAGCGCCATTTCATCACC 420
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | |||||||| |||| |||||| || ||||| ||| || || | | | ||
Sbjct 419 CACGTCCTTGCCTTCTTCGCCGCCTCCGACGGCATCGTACTCGAAAACCTCGCCGGC-CG 361
Query 125198 ATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGC-TTTTACGGATTCCAAATCAT 125254
|| | | ||| | | ||| || | |||| || || |||||||| ||||| |||
Sbjct 360 TTT-TATGAAG-GAGGTCCAGGTCTCCGAGGCC-CGCGCCTTTTACGGCTTCCAGATCGC 304
Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA-TC 125313
|| |||||| | ||||| || |||||| || | || | ||||| || ||
Sbjct 303 CATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATAAAAGACTC 244
Query 125314 CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
|| | | ||| | | |||||| |||| || ||||| | || | | | || ||||
Sbjct 243 CGTAGAGAAAAGCCGT-CTCTTTCACGCCATTGACACCATTCCCTGTGTCACCAAGAAGG 185
Query 125374 CTCAATGGGTGATTCGGTGGATCGA---TGACGACAAGTCTTCGTACGCCGACAGACTGG 125430
| | |||| | || |||||||| | |||| || | |||||| | | |
Sbjct 184 CCAACTGGGCCCTCCGCTGGATCGACTCTTCCGAC------TCCTTCGCCGAGCGCATCG 131
Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG-TTTTGCGGCCATCTTTTGG 125489
| ||||| ||| ||| ||||| |||||||| || || || |||||| ||||||| |||
Sbjct 130 TCGCATTTGCCTGCGTTGAGGGAATCTTCTTCTCCGGAAGCTTTTGCT-CCATCTTCTGG 72
Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549
|||||||| || || |||||||| ||||| || | ||||| | || || || |||
Sbjct 71 CTCAAGAAACGGGGCCTCATGCCAGGACTCACCTTCTCCAACGAACTCATCTCCCGCGAC 12
Query 125550 GAGGGCCTACA 125560
||||| || ||
Sbjct 11 GAGGGTCTCCA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 738983910026600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |