Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_004686.1 Length=56276 Score E Sequences producing significant alignments: (Bits) Value seq73813 102 3e-17 >seq73813 Length=1303 Score = 102 bits (112), Expect = 3e-17 Identities = 130/177 (73%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 34968 GTTGCCAAGGATGTGTGTGAGGCGGTCGGGATCAAGGCA--TACCGCGACGCGATCGCCC 35025 || || ||||||||||| || | |||| ||| | || || |||||||| |||| | Sbjct 177 GTCGCGAAGGATGTGTGCGATGTACTCGGCATC--GCCAAGTATCGCGACGCCTTCGCGC 120 Query 35026 AGCTCGACTCTGACGAAAGGGTGTCGGTCGCCGTCGACACCCTTGGGGGAGCCCAGAACA 35085 |||||||| | |||||||||| ||| | |||| ||||||||||| ||| ||| | Sbjct 119 AGCTCGACGCCGACGAAAGGGCGTCCGCGCCCGTGGACACCCTTGGCGGACGACAGCTGA 60 Query 35086 TGGTGGCCGTCACCGAGGCTGGCGTCTGGTCGCTGATGTTGATCAGCCGATCTCCGA 35142 || || ||||| |||| | || || | |||||||| | ||||| ||||| |||| Sbjct 59 TGACGGTCGTCAGCGAGCCCGGTGTGTTCGCGCTGATGCTCATCAGTCGATCGCCGA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179482827347460