Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 111 1e-19
seq158136 82.4 5e-11
>seq39107
Length=55737
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
|| || ||||| | | |||||| || |||||| ||| || |||||||| ||||||
Sbjct 48551 CCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGC- 48493
Query 43955 AATTGACGCTC-ATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | | || ||| |||| |||||| || ||||| || | || ||||| ||| ||||
Sbjct 48492 AAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGG 48433
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| || ||||| ||| || || ||||| || ||| ||||||| ||||||
Sbjct 48432 GATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCAC 48373
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| || ||||||||||||||||| || |||||
Sbjct 48372 CTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCTGCAT 48325
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
|| || ||||| | | |||||| || |||||| ||| || |||||||| ||||||
Sbjct 49814 CCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGC- 49756
Query 43955 AATTGACGCTC-ATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | | || ||| |||| |||||| || ||||| || | || ||||| ||| ||||
Sbjct 49755 AAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGG 49696
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| || ||||| ||| || || ||||| || ||| ||||||| ||||||
Sbjct 49695 GATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCAC 49636
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| || ||||||||||||||||| || |||||
Sbjct 49635 CTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCACAAAAATCTGCAT 49588
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTC-ATCGT 43970
|||||| || |||| ||| || |||||||| |||||| || | | || ||| |
Sbjct 43480 CACCAAGTGGCGCGTCGACTCCTTCTGAATATTGTAATCGGC-AAGGGTCCTTCCATCCT 43422
Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030
||| |||||| || ||||| || | || ||||| ||| |||| | || ||||| |||
Sbjct 43421 CCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTT 43362
Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090
|| || ||||| || ||| ||||||| |||||| || | || || ||||
Sbjct 43361 GGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTT 43302
Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || ||||||||||||||||| || |||||
Sbjct 43301 TTCCAGTTAAAGTCTTCACAAAAATCTGCAT 43271
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| || | ||||| || ||||| || | || |||||||| | || | ||| || |
Sbjct 16707 CATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCT 16648
Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084
|||| ||| || ||| || || ||| ||||||| |||||| || | ||||
Sbjct 16647 TATCCTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAA 16588
Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
| ||||| ||||| |||||||||||||| |||||||||
Sbjct 16587 TAGTTTTCCCGGTCAAAGTCTTCACAAAGATTTGCATG 16550
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| || | ||||| || ||||| || | || |||||||| | || | ||| || |
Sbjct 26481 CATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCT 26422
Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084
|||| ||| || ||| || || ||| ||||||| |||||| || | ||||
Sbjct 26421 TATCCTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAA 26362
Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
| ||||| ||||| |||||||||||||| |||||||||
Sbjct 26361 TAGTTTTCCCGGTCAAAGTCTTCACAAAGATTTGCATG 26324
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| || | ||||| || ||||| || | || |||||||| | || | ||| || |
Sbjct 29804 CATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCT 29745
Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084
|||| ||| || ||| || || ||| ||||||| |||||| || | ||||
Sbjct 29744 TATCCTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAA 29685
Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
| ||||| ||||| |||||||||||||| |||||||||
Sbjct 29684 TAGTTTTCCCGGTCAAAGTCTTCACAAAGATTTGCATG 29647
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| || | ||||| || ||||| || | || |||||||| | || | ||| || |
Sbjct 46735 CATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCT 46676
Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084
|||| ||| || ||| || || ||| ||||||| |||||| || | ||||
Sbjct 46675 TATCCTGAATCTTGGCTTTAACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTAA 46616
Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
| ||||| ||||| |||||||||||||| |||||||||
Sbjct 46615 TAGTTTTCCCGGTCAAAGTCTTCACAAAGATTTGCATG 46578
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 43907 CTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCA 43966
|||||||||||||| || ||| || || || || |||||||| | | |||| ||
Sbjct 16993 CTTAACACCAAATGAAGAGTGGATTCCTTCTGGATGTTATAATCAGCAAGTGTACGCCCA 16934
Query 43967 TCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTA 44026
|| |||| || || || ||||| || | || ||||||||| | || | ||| |||||
Sbjct 16933 TCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGAATACCCTCTTTG 16874
Query 44027 TCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATT 44086
|| || ||| || || | ||| ||||| | || || || | |||||
Sbjct 16873 TCCTGTATCTTTGCCTTTACATTGTCAATGGTATCAGAACTTTCAACCTCCAAAGTAATA 16814
Query 44087 GTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
||||| || || | |||||| ||||| |||||||||
Sbjct 16813 GTTTTTCCCGTCAGAGTCTTGACAAAAATTTGCATG 16778
>seq158136
Length=352
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971
||||||||| || || |||||| ||||| || |||||| | || |||| ||
Sbjct 230 CACCAAATGCAGGGTAGACTCTTTCTGAATGTTGTAATCGGCAAGGGTTCGGCCATCCTC 171
Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031
| |||||||| ||||| || | || ||||||||| | || | ||| ||||| ||
Sbjct 170 AAGCTGTTTTCCAGCAAAAATGAGCCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCCTG 111
Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091
||| || ||||| | ||| || || | ||||| || | || ||||| ||
Sbjct 110 AATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTTTCCACTTCAAGAGTGATTGTCTT 51
Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || ||||||||||| ||||||||
Sbjct 50 TCCCGTCAATGTCTTCACAAAGATTTGCAT 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 353808905817180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |