Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq39107 105 6e-18 seq67758 102 7e-17 seq78764 86.0 5e-12 >seq39107 Length=55737 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || ||| |||||||||||||||||||||||| | || ||||||| Sbjct 26306 CACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTC 26247 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || || ||||| || |||| || | |||||||||| || | || ||| |||||| Sbjct 26246 AAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTG 26187 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | |||||||| | || ||| ||| | || || ||||| Sbjct 26186 GATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTGATAGTTTT 26127 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| | ||||||||| || || |||||| Sbjct 26126 TCCGGTCAAAGTTTTCACGAAGATTTGCATC 26096 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || ||| |||||||||||||||||||||||| | || ||||||| Sbjct 29629 CACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTC 29570 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || || ||||| || |||| || | |||||||||| || | || ||| |||||| Sbjct 29569 AAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTG 29510 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | |||||||| | || ||| ||| | || || ||||| Sbjct 29509 GATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTGATAGTTTT 29450 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| | ||||||||| || || |||||| Sbjct 29449 TCCGGTCAAAGTTTTCACGAAGATTTGCATC 29419 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || ||| |||||||||||||||||||||||| | || ||||||| Sbjct 46560 CACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTC 46501 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || || ||||| || |||| || | |||||||||| || | || ||| |||||| Sbjct 46500 AAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTG 46441 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | |||||||| | || ||| ||| | || || ||||| Sbjct 46440 GATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTGATAGTTTT 46381 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| | ||||||||| || || |||||| Sbjct 46380 TCCGGTCAAAGTTTTCACGAAGATTTGCATC 46350 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCT 48575 ||| || || || ||| |||||| ||||| |||||||| || || ||| || |||| Sbjct 48534 CACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGC-AAGGGTCCTTCCATCCT 48476 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 |||| || ||||| | |||| | | |||||||||| || | | || ||||| Sbjct 48475 CCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTT 48416 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 || || ||||| | | |||||||| | | |||| ||| | |||||||||| Sbjct 48415 GGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTT 48356 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT--CGTGTCTTGATCGAAG 48742 | || || | ||| ||||||||||||||||| | |||| ||||||| Sbjct 48355 TTCCAGTTAAAGTCTTCACAAAAATCTGCATACCACCTCTTAATCGAAG 48307 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCT 48575 ||| || || || ||| |||||| ||||| |||||||| || || ||| || |||| Sbjct 49797 CACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGC-AAGGGTCCTTCCATCCT 49739 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 |||| || ||||| | |||| | | |||||||||| || | | || ||||| Sbjct 49738 CCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTT 49679 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 || || ||||| | | |||||||| | | |||| ||| | |||||||||| Sbjct 49678 GGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTT 49619 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT--CGTGTCTTGATCGAAG 48742 | || || | ||| ||||||||||||||||| | |||| ||||||| Sbjct 49618 TTCCAGTTAAAGTCTTCACAAAAATCTGCATACCACCTCTTAATCGAAG 49570 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCTCCAGCTGCTTACCGCCGT 48593 |||||| ||||| |||||||| || || ||| || |||||||| || ||||| | Sbjct 43462 CTCCTTCTGAATATTGTAATCGGC-AAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAA 43404 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 |||| | | |||||||||| || | | || ||||| || || ||||| | Sbjct 43403 AAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACAT 43344 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | |||||||| | | |||| ||| | ||||||||||| || || | ||| |||| Sbjct 43343 TATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCA 43284 Query 48714 CAAAAATCTGCAT--CGTGTCTTGATCGAAG 48742 ||||||||||||| | |||| ||||||| Sbjct 43283 CAAAAATCTGCATACCACCTCTTAATCGAAG 43253 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||||||||| |||||||| ||| ||||| || ||||| |||||||| Sbjct 17006 ACCCCCACGAAGCCTTAACACCAAATGAAGAGTGGATTCCTTCTGGATGTTATAATCAGC 16947 Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 || ||| ||| | || ||||||||||| || | | || | | ||||| || | Sbjct 16946 -AAGTGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTG 16888 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || || |||||| || || ||| | | | |||||||| | | || Sbjct 16887 GAATACCCTCTTTGTCCTGTATCTTTGCCTTTACATTGTCAATGGTATCAGAACTTTCAA 16828 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || || ||||| || || ||||| || |||||||| ||||| Sbjct 16827 CCTCCAAAGTAATAGTTTTTCCCGTCAGAGTCTTGACAAAAATTTGCAT 16779 >seq67758 Length=6344 Score = 102 bits (112), Expect = 7e-17 Identities = 148/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| || ||| |||||| || |||||||||||||||| || | |||||||| || Sbjct 4644 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTGCGGCCATCCTCCAGTTG 4585 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || ||||||||||| || || | | |||||||||| ||| || Sbjct 4584 CTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTT 4525 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||| | | | || ||||| |||| | |||| ||||| |||||||| |||||| Sbjct 4524 GGCCTTCACGTTGTCG--ATGGTGTCGGAACTCTCCACCTCGAGAGTTATGGTCTTACCG 4467 Query 48701 GTGAGAGTTTTCACAAAAATCTGCATC 48727 || | || || || || || |||||| Sbjct 4466 GTCAAGGTCTTGACGAAGATTTGCATC 4440 >seq78764 Length=1181 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48538 CTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAAT 48597 ||| || |||||||| || || | || | ||||| |||||||| ||| || | || Sbjct 416 CTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGAT 357 Query 48598 TAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGC 48657 | ||||||||||||| ||| | || ||||||||| || || ||| | | | Sbjct 356 GAGACGCTGCTGATCCGGCGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTATC 297 Query 48658 TATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAA 48717 || || || | |||||| ||| | || ||||| || || || || |||||||| || Sbjct 296 GATTGTGTCCGAAGACTCAACCTCAAGGGTAATGGTCTTCCCCGTAAGGGTTTTCACGAA 237 Query 48718 AATCTGCATCGT 48729 ||||||||||| Sbjct 236 TATCTGCATCGT 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420101004534035