Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 105 6e-18
seq67758 102 7e-17
seq78764 86.0 5e-12
>seq39107
Length=55737
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || || || ||| |||||||||||||||||||||||| | || |||||||
Sbjct 26306 CACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTC 26247
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|| || ||||| || |||| || | |||||||||| || | || ||| ||||||
Sbjct 26246 AAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTG 26187
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| || ||| | | | |||||||| | || ||| ||| | || || |||||
Sbjct 26186 GATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTGATAGTTTT 26127
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||||| | ||||||||| || || ||||||
Sbjct 26126 TCCGGTCAAAGTTTTCACGAAGATTTGCATC 26096
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || || || ||| |||||||||||||||||||||||| | || |||||||
Sbjct 29629 CACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTC 29570
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|| || ||||| || |||| || | |||||||||| || | || ||| ||||||
Sbjct 29569 AAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTG 29510
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| || ||| | | | |||||||| | || ||| ||| | || || |||||
Sbjct 29509 GATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTGATAGTTTT 29450
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||||| | ||||||||| || || ||||||
Sbjct 29449 TCCGGTCAAAGTTTTCACGAAGATTTGCATC 29419
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || || || ||| |||||||||||||||||||||||| | || |||||||
Sbjct 46560 CACCAAGTGGAGCGTGGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCTTCCGTCCTC 46501
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|| || ||||| || |||| || | |||||||||| || | || ||| ||||||
Sbjct 46500 AAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCCGGAGGGATACCTTCTTTGTCCTG 46441
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| || ||| | | | |||||||| | || ||| ||| | || || |||||
Sbjct 46440 GATCTTAGCCTTCACATTATCAATGGTATCAGAGGATTCCACCTCCAGGGTGATAGTTTT 46381
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||||| | ||||||||| || || ||||||
Sbjct 46380 TCCGGTCAAAGTTTTCACGAAGATTTGCATC 46350
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCT 48575
||| || || || ||| |||||| ||||| |||||||| || || ||| || ||||
Sbjct 48534 CACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGC-AAGGGTCCTTCCATCCT 48476
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||| || ||||| | |||| | | |||||||||| || | | || |||||
Sbjct 48475 CCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTT 48416
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|| || ||||| | | |||||||| | | |||| ||| | ||||||||||
Sbjct 48415 GGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTT 48356
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT--CGTGTCTTGATCGAAG 48742
| || || | ||| ||||||||||||||||| | |||| |||||||
Sbjct 48355 TTCCAGTTAAAGTCTTCACAAAAATCTGCATACCACCTCTTAATCGAAG 48307
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCT 48575
||| || || || ||| |||||| ||||| |||||||| || || ||| || ||||
Sbjct 49797 CACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGC-AAGGGTCCTTCCATCCT 49739
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
|||| || ||||| | |||| | | |||||||||| || | | || |||||
Sbjct 49738 CCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTT 49679
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
|| || ||||| | | |||||||| | | |||| ||| | ||||||||||
Sbjct 49678 GGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTT 49619
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT--CGTGTCTTGATCGAAG 48742
| || || | ||| ||||||||||||||||| | |||| |||||||
Sbjct 49618 TTCCAGTTAAAGTCTTCACAAAAATCTGCATACCACCTCTTAATCGAAG 49570
Score = 87.8 bits (96), Expect = 2e-12
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCTCCAGCTGCTTACCGCCGT 48593
|||||| ||||| |||||||| || || ||| || |||||||| || ||||| |
Sbjct 43462 CTCCTTCTGAATATTGTAATCGGC-AAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAA 43404
Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653
|||| | | |||||||||| || | | || ||||| || || ||||| |
Sbjct 43403 AAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACAT 43344
Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713
| |||||||| | | |||| ||| | ||||||||||| || || | ||| ||||
Sbjct 43343 TATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAAGTCTTCA 43284
Query 48714 CAAAAATCTGCAT--CGTGTCTTGATCGAAG 48742
||||||||||||| | |||| |||||||
Sbjct 43283 CAAAAATCTGCATACCACCTCTTAATCGAAG 43253
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || | ||||||||| |||||||| ||| ||||| || ||||| ||||||||
Sbjct 17006 ACCCCCACGAAGCCTTAACACCAAATGAAGAGTGGATTCCTTCTGGATGTTATAATCAGC 16947
Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
|| ||| ||| | || ||||||||||| || | | || | | ||||| || |
Sbjct 16946 -AAGTGTACGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGTCTGGTG 16888
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | || || |||||| || || ||| | | | |||||||| | | ||
Sbjct 16887 GAATACCCTCTTTGTCCTGTATCTTTGCCTTTACATTGTCAATGGTATCAGAACTTTCAA 16828
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || || ||||| || || ||||| || |||||||| |||||
Sbjct 16827 CCTCCAAAGTAATAGTTTTTCCCGTCAGAGTCTTGACAAAAATTTGCAT 16779
>seq67758
Length=6344
Score = 102 bits (112), Expect = 7e-17
Identities = 148/207 (71%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
||| || ||| |||||| || |||||||||||||||| || | |||||||| ||
Sbjct 4644 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTGCGGCCATCCTCCAGTTG 4585
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| || | || ||||||||||| || || | | |||||||||| ||| ||
Sbjct 4584 CTTCCCGGCGAAGATCAAACGCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTT 4525
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||| | | | || ||||| |||| | |||| ||||| |||||||| ||||||
Sbjct 4524 GGCCTTCACGTTGTCG--ATGGTGTCGGAACTCTCCACCTCGAGAGTTATGGTCTTACCG 4467
Query 48701 GTGAGAGTTTTCACAAAAATCTGCATC 48727
|| | || || || || || ||||||
Sbjct 4466 GTCAAGGTCTTGACGAAGATTTGCATC 4440
>seq78764
Length=1181
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48538 CTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAAT 48597
||| || |||||||| || || | || | ||||| |||||||| ||| || | ||
Sbjct 416 CTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGAT 357
Query 48598 TAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGC 48657
| ||||||||||||| ||| | || ||||||||| || || ||| | | |
Sbjct 356 GAGACGCTGCTGATCCGGCGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTATC 297
Query 48658 TATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAA 48717
|| || || | |||||| ||| | || ||||| || || || || |||||||| ||
Sbjct 296 GATTGTGTCCGAAGACTCAACCTCAAGGGTAATGGTCTTCCCCGTAAGGGTTTTCACGAA 237
Query 48718 AATCTGCATCGT 48729
|||||||||||
Sbjct 236 TATCTGCATCGT 225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420101004534035
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