Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq72301 107 1e-18
seq39445 107 1e-18
seq20909 107 1e-18
seq18510 105 3e-18
seq17271 105 3e-18
seq7393 105 3e-18
seq10144 102 4e-17
seq87738 100 1e-16
seq66610 100 1e-16
seq27303 100 1e-16
seq17638 100 1e-16
seq4473 100 1e-16
seq94537 95.1 6e-15
seq9132 95.1 6e-15
seq50328 89.7 3e-13
seq9783 86.0 3e-12
>seq72301
Length=11848
Score = 107 bits (118), Expect = 1e-18
Identities = 78/90 (87%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
|||||||| | || | ||||||||| | | |||||||| ||||||||||||||||||||
Sbjct 4248 AATAAAAACTGAATTATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCA 4189
Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||| |||| |||||||||| ||||
Sbjct 4188 CGACGCTCTAACCAGCTGAGCTAATAGGCC 4159
>seq39445
Length=10415
Score = 107 bits (118), Expect = 1e-18
Identities = 87/104 (84%), Gaps = 4/104 (4%)
Strand=Plus/Minus
Query 11429 AAATATAGAATTAATAAAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCT 11485
|| |||||| | || || ||| |||| ||||||||| ||| |||||||| ||||||
Sbjct 2291 AACTATAGA-TAAAAAACCAATGAAATGAATGGCCCATGCAAGTCTCGAACCTGCGACCT 2233
Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||| ||||||| ||||||||||||||| ||||
Sbjct 2232 TCGCGTTATTAGCACAACGCTCTAACCAACTGAGCTAATAGGCC 2189
>seq20909
Length=3609
Score = 107 bits (118), Expect = 1e-18
Identities = 75/86 (87%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| | |||||||||| | | |||||||| ||||||||||||||||||||||||
Sbjct 110 AAAAAACTATTTTGGCCCATGCAGGTCTCGAACCTACGACCTTCGCGTTATTAGCACGAC 169
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||| ||||
Sbjct 170 GCTCTAACCAACTGAGCTAATAGGCC 195
>seq18510
Length=11551
Score = 105 bits (116), Expect = 3e-18
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 5649 TTGGCCCATGTAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 5590
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 5589 CTGAGCTAATAGGCC 5575
Score = 102 bits (112), Expect = 4e-17
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 5842 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 5783
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 5782 CTGAGCTAATAGGCC 5768
>seq17271
Length=29068
Score = 105 bits (116), Expect = 3e-18
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 16361 TTGGCCCATGTAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 16420
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 16421 CTGAGCTAATAGGCC 16435
>seq7393
Length=2121
Score = 105 bits (116), Expect = 3e-18
Identities = 79/91 (87%), Gaps = 3/91 (3%)
Strand=Plus/Plus
Query 11442 ATAAAAA--ATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||||||| |||| ||| |||| ||| | | |||||||| |||||||||||||||||||
Sbjct 1183 ATAAAAAGCATCACATTTGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 1242
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||| ||||||||||||||| ||||
Sbjct 1243 ACGACGCTCTAACCAACTGAGCTAATAGGCC 1273
Score = 91.5 bits (100), Expect = 8e-14
Identities = 73/87 (84%), Gaps = 4/87 (5%)
Strand=Plus/Plus
Query 11442 ATAAAAA--ATCA--AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497
||||||| |||| | |||||| ||| | | | |||||| ||||||||||||||||||
Sbjct 670 ATAAAAAGCATCATTATTTGGCCAATGTAGGTCTTGAACCTGCGACCTTCGCGTTATTAG 729
Query 11498 CACGACGCTCTRACCAACTGAGCTAAT 11524
||||||||||| ||||| |||||||||
Sbjct 730 CACGACGCTCTAACCAATTGAGCTAAT 756
Score = 87.8 bits (96), Expect = 9e-13
Identities = 75/91 (82%), Gaps = 3/91 (3%)
Strand=Plus/Plus
Query 11442 ATAAAAA--ATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
||||||| |||| ||| |||||||| | | |||||| | |||| ||| ||||||||||
Sbjct 910 ATAAAAAGCATCACATTTGGCCCATGCAGGTCTCGAACTTGCGACTTTCACGTTATTAGC 969
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||| ||||| ||||| ||||||||| ||||
Sbjct 970 ACGATGCTCTAACCAAGTGAGCTAATAGGCC 1000
Score = 87.8 bits (96), Expect = 9e-13
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512
||||||| |||| | | |||||| | ||||||||| |||||||||| ||||||| |||
Sbjct 1425 AATTGGCTCATGCAGGTCTCGAACATGCGACCTTCGTATTATTAGCACAACGCTCTAACC 1484
Query 11513 AACTGAGCTAATGGGCC 11529
|||||||||||| ||||
Sbjct 1485 AACTGAGCTAATAGGCC 1501
>seq10144
Length=6816
Score = 102 bits (112), Expect = 4e-17
Identities = 69/78 (88%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2071 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 2012
Query 11512 CAACTGAGCTAATGGGCC 11529
|| |||||||||| ||||
Sbjct 2011 CAGCTGAGCTAATAGGCC 1994
>seq87738
Length=8181
Score = 100 bits (110), Expect = 1e-16
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512
|||||||| ||| | | |||||||| |||||||||||||||||||||||||||| |||
Sbjct 7335 AATTGGCCTATGCAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACC 7276
Query 11513 AACTGAGCTAATGGGCCGT 11531
| |||||||||| ||||||
Sbjct 7275 AGCTGAGCTAATAGGCCGT 7257
>seq66610
Length=5604
Score = 100 bits (110), Expect = 1e-16
Identities = 89/111 (80%), Gaps = 6/111 (5%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| ||||| || |||||||||| | | |||||||| ||||||| |||||||||||||
Sbjct 315 AAGAAAAATTC---TTGGCCCATGCAGGTCTCGAACCTGCGACCTTGGCGTTATTAGCAC 259
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGATTGTGATTTTTCAT 11551
||||||| ||||||||||||||| |||| | | |||| ||| |||||
Sbjct 258 CACGCTCTAACCAACTGAGCTAATAGGCCTTTGTTGATT---ATTGTTCAT 211
>seq27303
Length=5330
Score = 100 bits (110), Expect = 1e-16
Identities = 78/94 (83%), Gaps = 5/94 (5%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAA-----TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495
||| ||||| |||| |||||||||| ||| | |||||| | |||||| |||||||
Sbjct 236 AATGAAAAAACAAACTATTTTGGCCCATGCAAGTCTTGAACCTGCAACCTTCACGTTATT 177
Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||| ||||||||||||||| ||||
Sbjct 176 AGCACGACGCTCTAACCAACTGAGCTAATAGGCC 143
>seq17638
Length=6482
Score = 100 bits (110), Expect = 1e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 6183 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 6242
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 6243 TGAGCTAATAGGCC 6256
>seq4473
Length=17452
Score = 100 bits (110), Expect = 1e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 14148 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 14089
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 14088 TGAGCTAATAGGCC 14075
>seq94537
Length=3757
Score = 95.1 bits (104), Expect = 6e-15
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||| ||| | | |||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 153 TGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGTTCTAACCAAC 212
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 213 TGAGCTAATAGGCC 226
Score = 95.1 bits (104), Expect = 6e-15
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||| ||| | | |||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 2280 TGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGTTCTAACCAAC 2339
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 2340 TGAGCTAATAGGCC 2353
>seq9132
Length=19203
Score = 95.1 bits (104), Expect = 6e-15
Identities = 73/86 (85%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| ||||| |||| || | | | |||||| |||||||||||||||||||||||
Sbjct 12793 AAAAAAACAAAT-GGCCTATACAGGTCTTGAACCTGTGACCTTCGCGTTATTAGCACGAC 12851
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||| ||||
Sbjct 12852 GCTCTAACCAACTGAGCTAATAGGCC 12877
>seq50328
Length=15104
Score = 89.7 bits (98), Expect = 3e-13
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| | | |||||||| | ||||||||||||||||||||||| ||| ||||
Sbjct 14318 TTGGCCCATGCAGGTCTCGAACCTGCAACCTTCGCGTTATTAGCACGACGTTCTAACCAG 14259
Query 11515 CTGAGCTAATGGG 11527
|||||||||| ||
Sbjct 14258 CTGAGCTAATAGG 14246
>seq9783
Length=26918
Score = 86.0 bits (94), Expect = 3e-12
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| || ||||| ||||||||||||||||||| | ||||
Sbjct 19122 TGGCCCATGCAGGTCTCGAACCTGTGATCTTCGTGTTATTAGCACGACGCTCTAATCAAC 19181
Query 11516 TGAGCTAATGGGCC 11529
| ||||||||||||
Sbjct 19182 TAAGCTAATGGGCC 19195
Lambda K H
0.637 0.409 0.919
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 260777217481660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |