Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq72301 107 1e-18 seq39445 107 1e-18 seq20909 107 1e-18 seq18510 105 3e-18 seq17271 105 3e-18 seq7393 105 3e-18 seq10144 102 4e-17 seq87738 100 1e-16 seq66610 100 1e-16 seq27303 100 1e-16 seq17638 100 1e-16 seq4473 100 1e-16 seq94537 95.1 6e-15 seq9132 95.1 6e-15 seq50328 89.7 3e-13 seq9783 86.0 3e-12 >seq72301 Length=11848 Score = 107 bits (118), Expect = 1e-18 Identities = 78/90 (87%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||||| | || | ||||||||| | | |||||||| |||||||||||||||||||| Sbjct 4248 AATAAAAACTGAATTATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCA 4189 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||| |||||||||| |||| Sbjct 4188 CGACGCTCTAACCAGCTGAGCTAATAGGCC 4159 >seq39445 Length=10415 Score = 107 bits (118), Expect = 1e-18 Identities = 87/104 (84%), Gaps = 4/104 (4%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCT 11485 || |||||| | || || ||| |||| ||||||||| ||| |||||||| |||||| Sbjct 2291 AACTATAGA-TAAAAAACCAATGAAATGAATGGCCCATGCAAGTCTCGAACCTGCGACCT 2233 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||| ||||||| ||||||||||||||| |||| Sbjct 2232 TCGCGTTATTAGCACAACGCTCTAACCAACTGAGCTAATAGGCC 2189 >seq20909 Length=3609 Score = 107 bits (118), Expect = 1e-18 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | |||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 110 AAAAAACTATTTTGGCCCATGCAGGTCTCGAACCTACGACCTTCGCGTTATTAGCACGAC 169 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||||| |||| Sbjct 170 GCTCTAACCAACTGAGCTAATAGGCC 195 >seq18510 Length=11551 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 5649 TTGGCCCATGTAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 5590 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 5589 CTGAGCTAATAGGCC 5575 Score = 102 bits (112), Expect = 4e-17 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 5842 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 5783 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 5782 CTGAGCTAATAGGCC 5768 >seq17271 Length=29068 Score = 105 bits (116), Expect = 3e-18 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 16361 TTGGCCCATGTAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 16420 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 16421 CTGAGCTAATAGGCC 16435 >seq7393 Length=2121 Score = 105 bits (116), Expect = 3e-18 Identities = 79/91 (87%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 11442 ATAAAAA--ATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||| |||| ||| |||| ||| | | |||||||| ||||||||||||||||||| Sbjct 1183 ATAAAAAGCATCACATTTGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 1242 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| ||||||||||||||| |||| Sbjct 1243 ACGACGCTCTAACCAACTGAGCTAATAGGCC 1273 Score = 91.5 bits (100), Expect = 8e-14 Identities = 73/87 (84%), Gaps = 4/87 (5%) Strand=Plus/Plus Query 11442 ATAAAAA--ATCA--AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 ||||||| |||| | |||||| ||| | | | |||||| |||||||||||||||||| Sbjct 670 ATAAAAAGCATCATTATTTGGCCAATGTAGGTCTTGAACCTGCGACCTTCGCGTTATTAG 729 Query 11498 CACGACGCTCTRACCAACTGAGCTAAT 11524 ||||||||||| ||||| ||||||||| Sbjct 730 CACGACGCTCTAACCAATTGAGCTAAT 756 Score = 87.8 bits (96), Expect = 9e-13 Identities = 75/91 (82%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 11442 ATAAAAA--ATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||| |||| ||| |||||||| | | |||||| | |||| ||| |||||||||| Sbjct 910 ATAAAAAGCATCACATTTGGCCCATGCAGGTCTCGAACTTGCGACTTTCACGTTATTAGC 969 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||| ||||| ||||||||| |||| Sbjct 970 ACGATGCTCTAACCAAGTGAGCTAATAGGCC 1000 Score = 87.8 bits (96), Expect = 9e-13 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 ||||||| |||| | | |||||| | ||||||||| |||||||||| ||||||| ||| Sbjct 1425 AATTGGCTCATGCAGGTCTCGAACATGCGACCTTCGTATTATTAGCACAACGCTCTAACC 1484 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||||| |||| Sbjct 1485 AACTGAGCTAATAGGCC 1501 >seq10144 Length=6816 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 2071 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 2012 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 2011 CAGCTGAGCTAATAGGCC 1994 >seq87738 Length=8181 Score = 100 bits (110), Expect = 1e-16 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 |||||||| ||| | | |||||||| |||||||||||||||||||||||||||| ||| Sbjct 7335 AATTGGCCTATGCAGGTCTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACC 7276 Query 11513 AACTGAGCTAATGGGCCGT 11531 | |||||||||| |||||| Sbjct 7275 AGCTGAGCTAATAGGCCGT 7257 >seq66610 Length=5604 Score = 100 bits (110), Expect = 1e-16 Identities = 89/111 (80%), Gaps = 6/111 (5%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||| || |||||||||| | | |||||||| ||||||| ||||||||||||| Sbjct 315 AAGAAAAATTC---TTGGCCCATGCAGGTCTCGAACCTGCGACCTTGGCGTTATTAGCAC 259 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGATTGTGATTTTTCAT 11551 ||||||| ||||||||||||||| |||| | | |||| ||| ||||| Sbjct 258 CACGCTCTAACCAACTGAGCTAATAGGCCTTTGTTGATT---ATTGTTCAT 211 >seq27303 Length=5330 Score = 100 bits (110), Expect = 1e-16 Identities = 78/94 (83%), Gaps = 5/94 (5%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAA-----TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||| ||||| |||| |||||||||| ||| | |||||| | |||||| ||||||| Sbjct 236 AATGAAAAAACAAACTATTTTGGCCCATGCAAGTCTTGAACCTGCAACCTTCACGTTATT 177 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| ||||||||||||||| |||| Sbjct 176 AGCACGACGCTCTAACCAACTGAGCTAATAGGCC 143 >seq17638 Length=6482 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 6183 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 6242 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 6243 TGAGCTAATAGGCC 6256 >seq4473 Length=17452 Score = 100 bits (110), Expect = 1e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| | Sbjct 14148 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 14089 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 14088 TGAGCTAATAGGCC 14075 >seq94537 Length=3757 Score = 95.1 bits (104), Expect = 6e-15 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||| ||| | | |||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct 153 TGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGTTCTAACCAAC 212 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 213 TGAGCTAATAGGCC 226 Score = 95.1 bits (104), Expect = 6e-15 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||| ||| | | |||||||| ||||||||||||||||||||||||| ||| |||||| Sbjct 2280 TGGCCTATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGTTCTAACCAAC 2339 Query 11516 TGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 2340 TGAGCTAATAGGCC 2353 >seq9132 Length=19203 Score = 95.1 bits (104), Expect = 6e-15 Identities = 73/86 (85%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||||| |||| || | | | |||||| ||||||||||||||||||||||| Sbjct 12793 AAAAAAACAAAT-GGCCTATACAGGTCTTGAACCTGTGACCTTCGCGTTATTAGCACGAC 12851 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||||| |||| Sbjct 12852 GCTCTAACCAACTGAGCTAATAGGCC 12877 >seq50328 Length=15104 Score = 89.7 bits (98), Expect = 3e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| | ||||||||||||||||||||||| ||| |||| Sbjct 14318 TTGGCCCATGCAGGTCTCGAACCTGCAACCTTCGCGTTATTAGCACGACGTTCTAACCAG 14259 Query 11515 CTGAGCTAATGGG 11527 |||||||||| || Sbjct 14258 CTGAGCTAATAGG 14246 >seq9783 Length=26918 Score = 86.0 bits (94), Expect = 3e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| || ||||| ||||||||||||||||||| | |||| Sbjct 19122 TGGCCCATGCAGGTCTCGAACCTGTGATCTTCGTGTTATTAGCACGACGCTCTAATCAAC 19181 Query 11516 TGAGCTAATGGGCC 11529 | |||||||||||| Sbjct 19182 TAAGCTAATGGGCC 19195 Lambda K H 0.637 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260777217481660