Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 174 3e-38
seq95291 159 6e-34
>seq80997
Length=4773
Score = 174 bits (192), Expect = 3e-38
Identities = 257/364 (71%), Gaps = 0/364 (0%)
Strand=Plus/Plus
Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCG 211669
|||| |||||||||||| | ||||| || | | | ||||||| | |||||
Sbjct 4376 TTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACTTCTGTATTTATTA 4435
Query 211670 TAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTT 211729
| || || ||||| || ||||| || ||||| || || || ||||| || || |||| |
Sbjct 4436 TCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGAT 4495
Query 211730 CATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 211789
| | | ||||| ||||| ||||| |||||||| || |||| |||| || || |
Sbjct 4496 CTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAG 4555
Query 211790 GTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTG 211849
|||| || || ||||| |||||||||||||| || ||||||||||| | ||||| || |
Sbjct 4556 GTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCG 4615
Query 211850 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGAC 211909
||||||| | | | | | |||||| | | || | | |||||||| |
Sbjct 4616 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTG 4675
Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCAC 211969
||||||||||| | ||| | ||||||||||||||||| |||||| |||| ||| |
Sbjct 4676 AGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTC 4735
Query 211970 CTGT 211973
|||
Sbjct 4736 TTGT 4739
>seq95291
Length=6073
Score = 159 bits (176), Expect = 6e-34
Identities = 252/361 (70%), Gaps = 0/361 (0%)
Strand=Plus/Minus
Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCG 211669
|||| ||||||| |||| | ||||| || | | | |||||| | |||||
Sbjct 6021 TTGGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAATTCTGTATTTATTA 5962
Query 211670 TAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTT 211729
| || || ||||| || ||||| || ||||| || || || ||||| | || |||| |
Sbjct 5961 TCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGAT 5902
Query 211730 CATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 211789
| | | ||||| ||||| ||||| | |||||| || |||| |||| || || |
Sbjct 5901 CTCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAG 5842
Query 211790 GTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTG 211849
|||| || || ||||| |||||||||||||| || ||||||||||| | ||||| || |
Sbjct 5841 GTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCG 5782
Query 211850 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGAC 211909
||||||| | | | | | |||||| | | || | | |||||||| |
Sbjct 5781 GTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTG 5722
Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCAC 211969
||||||||||| | ||| | ||||||||||||||||| |||||| |||||||| |
Sbjct 5721 AGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTC 5662
Query 211970 C 211970
|
Sbjct 5661 C 5661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 805293692134600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |