Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 107 2e-18
seq44648 93.3 4e-14
>seq39107
Length=55737
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| || ||||| || | |||||| | ||| |||||||
Sbjct 40934 ATGCAGATCTTTGTGAAAACTTTGACTGGCAAGACCATCACCCTTGAAGTAGAATCGTCT 40993
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | ||||| ||||| |||||||| || || ||||| ||||||
Sbjct 40994 GACACCATTGATAATGTCAAGGCTAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAA 41053
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||||| | |||| | || ||||||||||| |||| |||| | | ||| || ||
Sbjct 41054 CAAAGGTTAATTTTTGCTGGTAAACAACTCGAGGATGGGAGAACCCTTGCCGATTACAAT 41113
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || || || |||| |||| ||
Sbjct 41114 ATTCAGAAGGAGTCCACGCTCCACTTGGTGCT 41145
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| || || |||||| | |||||| | || | |||||
Sbjct 26097 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 26156
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || | || || ||||| ||||||||||| || ||||| |||||
Sbjct 26157 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 26216
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || || |||||||| || || | |||| | | || || |||
Sbjct 26217 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 26276
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||||| || || || |||| |||| ||
Sbjct 26277 ATTCAAAAGGAGTCCACGCTCCACTTGGTGCT 26308
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| || || |||||| | |||||| | || | |||||
Sbjct 29420 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 29479
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || | || || ||||| ||||||||||| || ||||| |||||
Sbjct 29480 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 29539
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || || |||||||| || || | |||| | | || || |||
Sbjct 29540 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 29599
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||||| || || || |||| |||| ||
Sbjct 29600 ATTCAAAAGGAGTCCACGCTCCACTTGGTGCT 29631
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| || || |||||| | |||||| | || | |||||
Sbjct 46351 ATGCAAATCTTCGTGAAAACTTTGACCGGAAAAACTATCACCCTGGAGGTGGAATCCTCT 46410
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || | || || ||||| ||||||||||| || ||||| |||||
Sbjct 46411 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAAGAAGGTATCCCTCCGGATCAG 46470
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || || |||||||| || || | |||| | | || || |||
Sbjct 46471 CAGAGGTTGATTTTCGCTGGTAAACAACTTGAGGACGGAAGAACCCTTGCTGATTACAAC 46530
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||||| || || || |||| |||| ||
Sbjct 46531 ATTCAAAAGGAGTCCACGCTCCACTTGGTGCT 46562
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT--AGAATCA 26825
||||||| | |||||||| || || || ||||| | || || | ||| | ||| |
Sbjct 43770 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 43829
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
| || || || || | || ||| ||||||| || || || || || || || |||
Sbjct 43830 A--GATACAATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGAT 43887
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| || || || || | | ||| ||||| || ||||||| |||| | | || ||
Sbjct 43888 CAGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTAC 43947
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||||| || ||||||||||| | || ||||| |||| ||| | || ||||
Sbjct 43948 AACATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGAA 43999
>seq44648
Length=6574
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| || || | |||||||| | |||||| | || | |||
Sbjct 5083 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 5142
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | || || |||||| ||||| || || || || || || ||
Sbjct 5143 GACACCATAGACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACCAG 5202
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || ||||| | | ||| || ||||| ||||||| ||| | | || ||||||
Sbjct 5203 CAGAGGCTCATATTTGCCGGAAAGCAACTAGAAGATGGCCGAACCTTGGCAGATTATAAC 5262
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||||| ||||| || ||| ||||||| ||| || |||| | || ||||
Sbjct 5263 ATTCAGAAAGAGTCAACTCTCCATCTTGTCTTGCGACTCCGTGGTGGAA 5311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477321935865200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |