Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq15189 107 5e-18
seq91905 100 7e-16
seq88322 84.2 6e-11
>seq15189
Length=5727
Score = 107 bits (118), Expect = 5e-18
Identities = 164/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665
|||||| ||| | ||||| || ||| ||| ||||| || | ||| || | ||| |
Sbjct 1866 TTGCTTCCTTGTGTGCATGAACGATGATAGCATAGAGGGGATATATGAAACTTTGAAGGA 1925
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725
|||||| | ||| ||| || || ||||||||||| || ||||||| |||||||
Sbjct 1926 GTGTGCTATCATTAGCAAATCAGCTGGAGGAATTGGTGTGTCTGTCCACAACATTCGTGC 1985
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785
|| |||||| ||||| || ||| || || || || | ||||| ||| | ||
Sbjct 1986 TAAGGGCAGTTATATTCGTGGGACAAATGGGACGTCCAACGGCATTGTTCCAATGTTACG 2045
Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839
|||||| | ||||||| | || || |||||||| ||||| ||| | |||||
Sbjct 2046 TGTGTTCAATGATACTGCCCGCTATGTTGACCAGGGGGGAGGCAAGAGGAAAGG 2099
>seq91905
Length=5598
Score = 100 bits (110), Expect = 7e-16
Identities = 98/124 (79%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 111702 CAGTTTTATGTA-CACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATAT 111760
|||||||||||| ||| ||||| | | ||||| |||||||||||||||||||| || ||
Sbjct 4007 CAGTTTTATGTATCAC-ACGGGGAGTTATCATGTCAAATGTATCAGCGATCTGCGGACAT 4065
Query 111761 TGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCA 111820
|| || || |||| |||||||||||| ||| || || || || ||| | || |||||
Sbjct 4066 GGGCCTGGGCATTCCATTTAATATTGCATCTTATGCCCTTCTGACATGCATGATTGCTCA 4125
Query 111821 TTTT 111824
| ||
Sbjct 4126 TGTT 4129
>seq88322
Length=2502
Score = 84.2 bits (92), Expect = 6e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 363694 GGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGG 363753
||||||||||| || ||||||| ||||||| || |||||| ||||| || |||
Sbjct 1198 GGAATTGGTGTGTCTGTCCACAACATTCGTGCTAAGGGCAGTTATATTCGTGGGACAAAT 1257
Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813
|| || || || | ||||| ||| | |||||||| | ||||||| | || ||
Sbjct 1258 GGGACGTCCAACGGCATTGTTCCAATGTTACGTGTGTTCAATGATACTGCCCGCTATGTT 1317
Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGG 363839
|||||||| ||||| ||| | |||||
Sbjct 1318 GACCAGGGGGGAGGCAAGAGGAAAGG 1343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1299612390695370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |