Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq39107 111 1e-19
seq44648 105 6e-18
seq158136 96.9 3e-15
>seq39107
Length=55737
Score = 111 bits (122), Expect = 1e-19
Identities = 166/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG--GAGTCC 115342
||||||||||||||| || ||| | || ||||| ||||| || | ||| | |||| |
Sbjct 43770 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 43829
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|| ||| | ||||| || ||| ||| ||| ||||| || || ||||| ||
Sbjct 43830 AGATACA---ATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGA 43886
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|||||| || ||||| | ||| || ||||| | ||||||| | |||| | || |||||
Sbjct 43887 TCAGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTA 43946
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
||||| || ||||| ||||| | || |||| ||||| | || || ||||
Sbjct 43947 CAACATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGAA 43999
Score = 105 bits (116), Expect = 6e-18
Identities = 165/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG--GAGTCC 115342
||||||||||||||| || ||| | || ||||| ||||| || | ||| | |||| |
Sbjct 48780 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 48839
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|| ||| | ||||| || ||| ||| ||| ||||| || || ||||| ||
Sbjct 48840 AGATACA---ATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGA 48896
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|||||| || ||||| | ||| || ||||| | ||||||| | ||| | || |||||
Sbjct 48897 TCAGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGGACCCTTGCGGATTA 48956
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
||||| || ||||| ||||| | || |||| ||||| | || || ||||
Sbjct 48957 CAACATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGAA 49009
Score = 105 bits (116), Expect = 6e-18
Identities = 165/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG--GAGTCC 115342
||||||||||||||| || ||| | || ||||| ||||| || | ||| | |||| |
Sbjct 50043 AATGCAAATTTTTGTAAAGACGTTGACAGGAAAGACCATAACTTTGGAAGTGGAGAGTTC 50102
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|| ||| | ||||| || ||| ||| ||| ||||| || || ||||| ||
Sbjct 50103 AGATACA---ATTGACAATGTGAAAGCAAAGATTCAGGATAAGGAGGGTATCCCCCCAGA 50159
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|||||| || ||||| | ||| || ||||| | ||||||| | ||| | || |||||
Sbjct 50160 TCAGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGGACCCTTGCGGATTA 50219
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
||||| || ||||| ||||| | || |||| ||||| | || || ||||
Sbjct 50220 CAACATCCAGAAAGAATCTACCCTGCACCTGGTTTTGAGGCTTCGTGGTGGAA 50272
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343
|||||||| ||||| || || | || || ||||| |||||| | || |||| | ||
Sbjct 46579 ATGCAAATCTTTGTGAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 46638
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
| | || ||| | || ||| || ||| ||||| || || | ||| || |
Sbjct 46639 G--ATACCATTGATAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACC 46696
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| || ||||| | ||| || ||||| | ||||||| | |||| | || |||||||
Sbjct 46697 AGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATA 46756
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
|||| || ||||| ||||| | || |||| ||||| | || || ||||
Sbjct 46757 ACATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAGGCTTCGTGGTGGAA 46807
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343
|||||||| ||||| || || | || || ||||| |||||| | || |||| | ||
Sbjct 16551 ATGCAAATCTTTGTGAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 16610
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
| | || ||| | || ||| || ||| ||||| || || | ||| || |
Sbjct 16611 G--ATACCATTGATAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACC 16668
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| || ||||| | ||| || ||||| | ||||||| | |||| | || |||||||
Sbjct 16669 AGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATA 16728
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500
|||| || ||||| ||||| | || |||| |||||
Sbjct 16729 ACATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 16765
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343
|||||||| ||||| || || | || || ||||| |||||| | || |||| | ||
Sbjct 26325 ATGCAAATCTTTGTGAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 26384
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
| | || ||| | || ||| || ||| ||||| || || | ||| || |
Sbjct 26385 G--ATACCATTGATAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACC 26442
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| || ||||| | ||| || ||||| | ||||||| | |||| | || |||||||
Sbjct 26443 AGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATA 26502
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500
|||| || ||||| ||||| | || |||| |||||
Sbjct 26503 ACATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 26539
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343
|||||||| ||||| || || | || || ||||| |||||| | || |||| | ||
Sbjct 29648 ATGCAAATCTTTGTGAAGACTTTGACCGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 29707
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
| | || ||| | || ||| || ||| ||||| || || | ||| || |
Sbjct 29708 G--ATACCATTGATAATGTTAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACC 29765
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| || ||||| | ||| || ||||| | ||||||| | |||| | || |||||||
Sbjct 29766 AGCAGAGGCTTATCTTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATA 29825
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500
|||| || ||||| ||||| | || |||| |||||
Sbjct 29826 ACATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 29862
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CG-GAGTCCA 115343
|||||||| |||||||| || | || || || ||||||||| | || || |||| ||
Sbjct 41162 ATGCAAATCTTTGTCAAGACTTTGACTGGGAAGACCATTACCCTTGAGGTCGAGAGTTCA 41221
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
| | || ||| | || ||| || ||| ||||| || || | ||| || |
Sbjct 41222 G--ATACCATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACC 41279
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| || ||||| | || || ||||| | ||||||| | |||| | || |||||||
Sbjct 41280 AGCAGAGGCTTATCTTCGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCGGATTATA 41339
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500
|||| || ||||| ||||| | || |||| |||||
Sbjct 41340 ACATCCAGAAAGAATCTACCCTGCACTTGGTTTTGAG 41376
>seq44648
Length=6574
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| |||||||| || ||||| ||||| ||||| ||| | || ||| |
Sbjct 5083 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCT 5142
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | |||| || || || ||| || || || || |||| || ||
Sbjct 5143 GACACCATAG-ACAATGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCAGACCA 5201
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| || || || | ||| || || ||| ||||||||| | |||| |||| ||||||||
Sbjct 5202 GCAGAGGCTCATATTTGCCGGAAAGCAACTAGAAGATGGCCGAACCTTGGCAGATTATAA 5261
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
|||||| |||||||| ||| | ||| | || ||| || | || || ||||
Sbjct 5262 CATTCAGAAAGAGTCAACTCTCCATCTTGTCTTGCGACTCCGTGGTGGAA 5311
>seq158136
Length=352
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
||||||||| ||||| || || | |||||||| || || || | ||| ||| |
Sbjct 20 AATGCAAATCTTTGTGAAGACATTGACGGGAAAGACAATCACTCTTGAAGTGGAAAGCTC 79
Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
||||| ||| |||| || || || ||| || ||||| || |||| || |
Sbjct 80 TGACACCATTG-ACAATGTCAAGGCTAAGATTCAGGACAAAGAGGGTATCCCACCAGACC 138
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
||||||| || |||| ||| || ||||| | || |||| | |||| | |||||||| |
Sbjct 139 AGCAAAGGCTCATTTTTGCTGGAAAACAGCTTGAGGATGGCCGAACCCTTGCCGATTACA 198
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495
||||||| ||||||||||| | ||| |||||
Sbjct 199 ACATTCAGAAAGAGTCTACCCTGCATTTGGTG 230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424182629444200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |