Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq66253 100 6e-16
seq44741 89.7 1e-12
seq76591 87.8 4e-12
seq76096 87.8 4e-12
seq14055 87.8 4e-12
seq58466 86.0 1e-11
seq53825 84.2 4e-11
seq42794 84.2 4e-11
>seq66253
Length=8278
Score = 100 bits (110), Expect = 6e-16
Identities = 166/240 (69%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 218569 TCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCA 218628
|||||||| |||| |||||||||||||| || | ||||| || || | ||
Sbjct 5670 TCTATTCCGTCAATGGTTGATGGCCTCAAGCCTGGTCAAAGGAAGATTCTGTTCTGCTCA 5611
Query 218629 TTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAA 218688
|| ||| ||| || | ||||||| || || || |||||| ||||||||| || ||
Sbjct 5610 TTTAAGAAGAAATTGTTCAAAGAAATAAAAGTAGCCCAGTTTATTGGTTATGTGTCTGAG 5551
Query 218689 ATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAG 218748
||||| |||||||| |||||||| ||| | | | ||| | ||||||||
Sbjct 5550 CATTCTGCTTACCATCATGGTGAGCAAAGTTTATCTAGCACAATTATCAATATGGCACAA 5491
Query 218749 GACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808
|| | |||||| || |||||| | || | || || || ||||| |||||| |||||
Sbjct 5490 GATTTTGTGGGTAGCAACAACGTCAATCTTCTTAAACCAAATGGTCAATTTGGTACTCGT 5431
>seq44741
Length=8417
Score = 89.7 bits (98), Expect = 1e-12
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||
Sbjct 2104 TAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 2163
Query 142562 GCCCCAC 142568
|||||||
Sbjct 2164 GCCCCAC 2170
Score = 89.7 bits (98), Expect = 1e-12
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||
Sbjct 4545 TAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 4604
Query 142562 GCCCCAC 142568
|||||||
Sbjct 4605 GCCCCAC 4611
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 1955 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2014
Query 142563 CCCCAC 142568
||||||
Sbjct 2015 CCCCAC 2020
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 4396 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 4455
Query 142563 CCCCAC 142568
||||||
Sbjct 4456 CCCCAC 4461
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||||
Sbjct 8010 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8069
Query 142564 CCCAC 142568
|||||
Sbjct 8070 CCCAC 8074
>seq76591
Length=10161
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 3666 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3725
Query 142563 CCCCAC 142568
||||||
Sbjct 3726 CCCCAC 3731
>seq76096
Length=1386
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 268 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 327
Query 142563 CCCCAC 142568
||||||
Sbjct 328 CCCCAC 333
>seq14055
Length=7868
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 7377 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 7318
Query 142563 CCCCAC 142568
||||||
Sbjct 7317 CCCCAC 7312
Score = 84.2 bits (92), Expect = 4e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || ||||||||||||| |||
Sbjct 5438 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTTGAG 5379
Query 142563 CCCCAC 142568
||||||
Sbjct 5378 CCCCAC 5373
>seq58466
Length=13447
Score = 86.0 bits (94), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||||
Sbjct 5793 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5852
Query 142564 CCCAC 142568
|||||
Sbjct 5853 CCCAC 5857
>seq53825
Length=5318
Score = 84.2 bits (92), Expect = 4e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||| ||
Sbjct 374 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCAAG 315
Query 142563 CCCCAC 142568
||||||
Sbjct 314 CCCCAC 309
>seq42794
Length=16633
Score = 84.2 bits (92), Expect = 4e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|| ||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 2725 AGTCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2666
Query 142563 CCCCAC 142568
||||||
Sbjct 2665 CCCCAC 2660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1024886447463435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |