Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq205188 241 2e-58 seq222699 203 6e-47 >seq205188 Length=846 Score = 241 bits (266), Expect = 2e-58 Identities = 315/433 (73%), Gaps = 5/433 (1%) Strand=Plus/Minus Query 42407 TTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCT 42466 |||| ||| || | || ||||||||||||||||| |||||||| || || ||||| Sbjct 429 TTTCATCACCCACGTCCTTGCCTTCTTCGCCGCCTCCGACGGCATCGTACTCGAAAACCT 370 Query 42467 GGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCA 42526 ||| | | || ||||| ||||| ||| || ||||| ||| ||| ||||||||||| Sbjct 369 CGCCGGCCGTTTTATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGCCTTTTACGGCTTCCA 310 Query 42527 GATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCT 42586 ||| ||||| |||||| | ||||| ||| ||||| | || ||| | || ||||| Sbjct 309 GATCGCCATCGAGAACATTCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATAAA 250 Query 42587 GGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646 || |||| ||| | | | || || | ||||| || || || ||||| ||| || Sbjct 249 AGACTCCGTAGAGAAAAGCCGTCTCTTTCACGCCATTGACACCATTCCCTGTGTCACCAA 190 Query 42647 GAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 |||||| ||||||| ||| ||||||||| | ||||| | |||| |||| | | Sbjct 189 GAAGGCCAACTGGGCCCTCCGCTGGATCGACTCTTCCGAC---TCCTTCGCCGAGCGCAT 133 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || || ||| || ||| ||||| ||||||||||| || ||| |||||||||||| Sbjct 132 CGTCGCATTTGCCTGCGTTGAGGGAATCTTCTTCTCCGGAAGCTTTTGCTCCATCTTCTG 73 Query 42767 GCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||||||| | | || | | ||||| |||||||||||||| |||||||||||| | | | Sbjct 72 GCTCAAG-AAACGGGGCCTCATGCCAGGACTCACCTTCTCCAACGAACTCATCTCCCGCG 14 Query 42826 ACGAGGGGCTGCA 42838 ||||||| || || Sbjct 13 ACGAGGGTCTCCA 1 >seq222699 Length=2956 Score = 203 bits (224), Expect = 6e-47 Identities = 428/631 (68%), Gaps = 13/631 (2%) Strand=Plus/Plus Query 42240 GAGCCGCTCCTGGCGCCGAGCAACTCCAGGTTCACCCTGGACGTGATCGAGCACCAGGAC 42299 ||||| |||||||| |||| | | | ||||| | || | ||| | ||| | Sbjct 59 GAGCCACTCCTGGCCCCGAACCCCGACCGGTTCTGCATGTTCCCAATCCAATACCCCCAA 118 Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 || ||| ||||||||||| || | ||| |||||||||||| ||| |||| || Sbjct 119 ATTTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGATCTT 178 Query 42360 GCCAAGGACA-CGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAA 42418 || | ||| | ||| |||||| || || | || ||| | ||| ||| | Sbjct 179 TCCCAAGACCTCCGCCA-CTGGGACTCCCTCACCGACGGCGAGCGCTACTTCATCACCCA 237 Query 42419 CATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTT 42478 | | || |||||||| |||||||| |||||||| || || ||||| ||| || | || Sbjct 238 CGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGCCGCCCGCTT 297 Query 42479 CATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTT-CTACGGCTTCCAGATAGCCATAG 42537 |||||| || | || | ||||| || ||||| ||||||||||||||| ||||| | Sbjct 298 CATGAAGGAAATCCAAGCCGCCGAGGCCCG-TGCTTTCTACGGCTTCCAGATCGCCATCG 356 Query 42538 AGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCG 42594 ||||| | ||||| ||| ||||| | || ||| | || |||||| || || Sbjct 357 AGAACATCCACTCCGAGATGTAC---AGTCTCCTCTTGGAAACCTACATCAAAGACTCCA 413 Query 42595 TCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654 ||| || |||||| ||| | || || || ||||| || |||||||| Sbjct 414 CCGAAAAGAATCACCTGTTCCGCGCCGTAGATACCATCCCCTGTGTCGCCAAGAAGGCCC 473 Query 42655 ACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCT 42714 | ||||| | ||||||||| ||||| | || | |||| | || || |||| Sbjct 474 AATGGGCCTTGCGCTGGATCGATGCCACCGACTCC---TTTGCCGAGCGCCTCGTCGCCT 530 Query 42715 TTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774 | || ||||||||| ||||||||||| ||| |||| ||| || || ||||| ||| Sbjct 531 TCGCCTGCGTCGAGGGAATCTTCTTCTCCGGCAGCTTCTGCTCGATATTTTGGCTAAAGA 590 Query 42775 AGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 || | | ||||||||| ||||||||||| ||||||||||| | || || |||| Sbjct 591 AGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAACGAACTCATATCGCGAGATGAAGGGC 650 Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTCTC 42865 | || | ||||| || |||||| ||| ||| Sbjct 651 TTCACTGCGACTTCGCGTGCCTCTTGTACTC 681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 941694637091600