Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_009603.1
Length=46365
Score E
Sequences producing significant alignments: (Bits) Value
seq25874 298 2e-76
seq21506 297 6e-76
seq134086 269 8e-68
seq67776 250 7e-62
seq39539 187 7e-43
seq141262 105 2e-18
>seq25874
Length=1183
Score = 298 bits (330), Expect = 2e-76
Identities = 207/235 (88%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 41587 GAACGAGACGTTCCCGCCCGTGACCGGGGTGCCCAGGGCGTAGCAGCCGTCGGCGAGCCC 41646
|||||||||||| ||||| ||||| ||||||||||| ||||||||||||| ||||| ||
Sbjct 455 GAACGAGACGTTGCCGCCGGTGACGGGGGTGCCCAGCTCGTAGCAGCCGTCTGCGAGGCC 514
Query 41647 GTCCACCGTCTGACCGAACTGCCACATGACCTCGGGATTCTCCGGGGAGCCGAAGTTCAG 41706
||| || ||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||
Sbjct 515 GTCGACGGTCTGCCCGAACTGCCACATGACCTCGGGGTTCTCGGGAGAGCCGAAGTTGAG 574
Query 41707 GCAGTCGGTGACCGCAGTGGGCACGGCGCCGGTGACCGCGACGTTGCGGTAGGCCTCGGC 41766
||||||||||| || || |||||||| |||||||| ||||||||||| || ||||||||
Sbjct 575 GCAGTCGGTGATGGCCGTTGGCACGGCACCGGTGACGGCGACGTTGCGATACGCCTCGGC 634
Query 41767 GAGGGCGAGCTGTGCGCCCGCGTACGGGTCGAGCTGGCAGTAGCGGCCGTTCGCG 41821
||| |||||||| ||||| |||||||| || |||||||||||||||||||| |||
Sbjct 635 GAGCGCGAGCTGCGCGCCGGCGTACGGATCAAGCTGGCAGTAGCGGCCGTTGGCG 689
Score = 158 bits (174), Expect = 4e-34
Identities = 114/132 (86%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 42107 GTGGACGGGTCCACGTCGACGATCCGCTCTCCCTGCCAGTCGATGACGAGACGGCCGTCG 42166
|| || ||||| || |||||||| ||||| |||||||||||||||| ||| || || |||
Sbjct 1047 GTCGAGGGGTCGACATCGACGATGCGCTCGCCCTGCCAGTCGATGATGAGGCGTCCATCG 1106
Query 42167 CCGGTGACCTCGCCGAGCACGGAGGTCTCCACCTCCCACTTGCCGGTGACGGCGAGGAAC 42226
||||||||||||||||||||||||||||| |||||||||||| |||||| |||||
Sbjct 1107 CCGGTGACCTCGCCGAGCACGGAGGTCTCGACCTCCCACTTGTTCACGACGGCCAGGAAG 1166
Query 42227 GCGTCGAGCTTC 42238
||||||||||||
Sbjct 1167 GCGTCGAGCTTC 1178
Score = 109 bits (120), Expect = 2e-19
Identities = 72/80 (90%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 41207 TCGCGCTCCATGAGCTCGGTGAGCCACACGCGCGCGCCGACGCCGAAGCGCATCACGCCC 41266
|||||||| |||| |||| ||||||| || || |||||||||||||||||||| ||||||
Sbjct 3 TCGCGCTCGATGATCTCGTTGAGCCAGACCCGGGCGCCGACGCCGAAGCGCATGACGCCC 62
Query 41267 TCGGCGAGGGCCTGCGCGAG 41286
||||| ||||||||||||||
Sbjct 63 TCGGCCAGGGCCTGCGCGAG 82
>seq21506
Length=5703
Score = 297 bits (328), Expect = 6e-76
Identities = 208/237 (88%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 11033 GTGGGGAACCTCACTGCAGACCCTGAGCTGCGTTACACGCAGAACGGGCTGCCGGTGGCG 11092
||||| |||||||| || ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 5338 GTGGGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGGGCTGCCGGTGGCG 5279
Query 11093 AACTTCACCATCGCATCGACGCCGCGCACCTTCGACCGTCAGGCGAACGAGTGGAAGGAC 11152
||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||
Sbjct 5278 AACTTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCGCGAACGAGTGGAAGGAC 5219
Query 11153 GGCGAAGCGCTGTTCCTCCGTGCGTCCGTGTGGCGCGAGTTCGCGGAGCACGTGGCGGGT 11212
|||||||||||||||||||| || || |||||||| |||||||| ||||||||||||||
Sbjct 5218 GGCGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGGGC 5159
Query 11213 TCGCTGACCAAGGGCATGCGGGTCATCGCATCCGGACGCCTGAAGCAGCGCTCCTAC 11269
||||| |||||||||||||| || ||||| || || ||| ||||| ||||||
Sbjct 5158 TCGCTCACCAAGGGCATGCGCGTGATCGCGCAGGGTCGTCTGCGCCAGCGTTCCTAC 5102
>seq134086
Length=262
Score = 269 bits (298), Expect = 8e-68
Identities = 175/192 (91%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42291 CCTCGGCCGTGAGCGAGGGGTCGCGGAGGAGCACGTTGTCGAGCGAGACGTGCATTCCGC 42350
||||||||||||| | ||||||||| || |||||||||||||||||||||||||| ||||
Sbjct 1 CCTCGGCCGTGAGTGTGGGGTCGCGCAGCAGCACGTTGTCGAGCGAGACGTGCATGCCGC 60
Query 42351 TGTTGCCGTTGGCGGCGAGCTCGCTCGTGGCGCAGGAGATGCCTGCAGCCCCGAGGTCCT 42410
||||||||||||| ||||||||||| || |||||||||||||| || || ||||||||||
Sbjct 61 TGTTGCCGTTGGCCGCGAGCTCGCTGGTCGCGCAGGAGATGCCGGCGGCGCCGAGGTCCT 120
Query 42411 GGATCGCCTCGACCAGCTCGTCGCGGTACAGCTCCAGGCAGCACTCGATGAGCACCTTCT 42470
||||||||||||| || ||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct 121 GGATCGCCTCGACGAGTTCGCCGCGGTAGAGCTCCAGACAGCACTCGATGAGCACCTTCT 180
Query 42471 CGGCGAAGGGGT 42482
||||||| ||||
Sbjct 181 CGGCGAACGGGT 192
>seq67776
Length=997
Score = 250 bits (276), Expect = 7e-62
Identities = 279/373 (75%), Gaps = 0/373 (0%)
Strand=Plus/Minus
Query 44232 TGGCTGTTCTTCCCCCTCCTGACGCTAGAGGGCATCAATCTCCACGCCTTGAGCGTCCGA 44291
||||| |||||||||||||||||||| ||||| |||| || ||| | | || |
Sbjct 640 TGGCTCTTCTTCCCCCTCCTGACGCTCGAGGGGCTCAACCTGCACTACCTCGGCCTGAAG 581
Query 44292 CACCTTCTCTCCTCGCACCCGGTTCGTGGCCGCTGGCAAGAGCTGGGGATGCTCGCCGTG 44351
||||| | | | | || || |||||| || || || | ||| | |
Sbjct 580 CACCTGATGACGCGGAAGAACGTGAAGGGACGCTGGACCGAACTCGGTCTCATCGTCCTC 521
Query 44352 CGATTCTCGGCCGTGCTCGTCCCGGTGTTTCTCATGCTCCCTCTTGGCATGGCGTTCGCC 44411
|| ||| | | | | ||||| ||| |||| ||| ||||||| | |||||||| |||||
Sbjct 520 CGGTTCGCCGTCCTCCTCGTGCCGCTGTTCCTCCTGCTCCCCGTCGGCATGGCCTTCGCG 461
Query 44412 TTCATGGGCGTCCAGCTCGCCGTCTTCGGCGTGTACATGGGGGCCTCGTTCGCTCCGAAC 44471
||| ||||||| |||||||| ||||||||||| |||||||| || || ||||| || |||
Sbjct 460 TTCCTGGGCGTGCAGCTCGCGGTCTTCGGCGTCTACATGGGCGCGTCCTTCGCCCCCAAC 401
Query 44472 CACAAGGGCATGCCGATCATCGCGTCCGATGCCCGCCTCGACTTCTTCACCAAGCAGGTG 44531
||||||||||||||| ||||||| |||| ||| |||||||||||| | |||||||||
Sbjct 400 CACAAGGGCATGCCGGTCATCGCCCCCGAGGCCAAGCTCGACTTCTTCTCGAAGCAGGTG 341
Query 44532 GGCACCTCCCGCAACATACGCGGAGGCTGGTGGGCCACCTGGCTCATGGGCGGGCTGAAC 44591
|||| || |||||||| || || || ||||||| || |||| |||||||| || |||
Sbjct 340 CGCACGTCGCGCAACATCCGTGGCGGATGGTGGGTGACGGGGCTGATGGGCGGCCTCAAC 281
Query 44592 TACCAGATCGAGC 44604
||||| ||||||
Sbjct 280 CACCAGGTCGAGC 268
Score = 232 bits (256), Expect = 2e-56
Identities = 232/308 (75%), Gaps = 0/308 (0%)
Strand=Plus/Minus
Query 43929 TGGTTCCAGCTCCTTATCGCCGCCGCTCTCGGCATCCTGTTCACCCAGGTGGCTTTCCTC 43988
|||||||||||||| ||||||||||| ||||| || | ||||| ||||| || ||||||
Sbjct 997 TGGTTCCAGCTCCTCATCGCCGCCGCCCTCGGGGTCGTCTTCACGCAGGTCGCCTTCCTC 938
Query 43989 GCGCACGAGGCGGCACACCGGCAGATNNNNNNNNNNNNNNNNNNNNNCCTTCGGCTCGCG 44048
|| || |||||||| ||||||||||| | | || || ||
Sbjct 937 GCCCATGAGGCGGCGCACCGGCAGATCCTCTCCACGGGACCTGCTAACTTCCGCCTGGCC 878
Query 44049 AGGGTCCTCGGCGGGATCGTCGGCATGAGCTATTCCTGGTGGGACTCGAAGCACACGCGG 44108
| || |||| ||| ||| ||||||||||||| |||||||||||| |||||||| |||
Sbjct 877 CGCGTGCTCGCCGGCATCATCGGCATGAGCTACCACTGGTGGGACTCCAAGCACACCCGG 818
Query 44109 CACCATGGCAACCCGAATCGTGTCGGCAAGGATCCTGATATCGAGGTTGATACGATCTCG 44168
||||| ||||||||||| | ||||||||||| || || ||| |||| || || |||||
Sbjct 817 CACCACGGCAACCCGAACCAGGTCGGCAAGGACCCCGACATCCAGGTCGACACCATCTCC 758
Query 44169 TTCCTCGACGAGGACGCCTCCCGATCGCGTGGCGTCGTCCGATTGATCACGAGGAAGCAG 44228
||||| || ||||| || | | ||||||||| ||||||| | |||||| | ||||||
Sbjct 757 TTCCTGGAGGAGGATGCGGCGCAGTCGCGTGGCATCGTCCGGCTCATCACGCGCAAGCAG 698
Query 44229 GGATGGCT 44236
|| |||||
Sbjct 697 GGGTGGCT 690
Score = 134 bits (148), Expect = 4e-27
Identities = 127/162 (78%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 44621 CATGCCTCGGATCCATCTGTCCCAGGCAAGGAAGATCGTGCGCGAGCACTGCACCGCAAA 44680
|||| | ||| | || ||||| ||||| | ||||||||||| ||||| |||| ||
Sbjct 177 CATGTCGCGGCTGCACCTGTCGAAGGCACGCGGCATCGTGCGCGACTACTGCGCCGCCAA 118
Query 44681 CGACGTGCCGTACACCGAGACCACACTGCTTCGGTCATACGCCATCGTGATCGACTACCT 44740
|| | | |||||||| ||||| | || | ||| ||||| ||||| |||| ||||||
Sbjct 117 CGGCATCCCGTACACGGAGACGAGCCTCGGGCAGTCGTACGCGATCGTCATCGCCTACCT 58
Query 44741 CAACCGCGTCGGCCTGGCAGCGCGCGACCCCTTCGACTGCCC 44782
||||||||| |||||||| ||||||||||| |||||||||||
Sbjct 57 CAACCGCGTGGGCCTGGCGGCGCGCGACCCGTTCGACTGCCC 16
>seq39539
Length=846
Score = 187 bits (206), Expect = 7e-43
Identities = 130/148 (88%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 40991 AGCGTGGCACGCGAGGTCTCGCGCAGCTCGGCGGCGGAGACGGTGAAGACGTCCTGCACC 41050
|||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 699 AGCGTGGCCTGCGAGCGCTCGCGGAGCTCGGCGGCCGAGACGGTGAAGACGTCCTGCACC 758
Query 41051 TCGAGCGTCGGCTCGCTGTCGGTCACGCCGATCCGCAGCACCGGATAGCCGCGCCCCTCG 41110
|||||| |||||||||||| || |||||||| || ||||| |||||||| ||||||
Sbjct 759 TCGAGCTGCGGCTCGCTGTCCGTGACGCCGATGCGGGCGACCGGGTAGCCGCGGCCCTCG 818
Query 41111 CAGAGGCCGCGGAACTTCACGTCGTCCT 41138
||||| ||||||||||||||||||||||
Sbjct 819 CAGAGCCCGCGGAACTTCACGTCGTCCT 846
>seq141262
Length=283
Score = 105 bits (116), Expect = 2e-18
Identities = 133/179 (74%), Gaps = 3/179 (2%)
Strand=Plus/Minus
Query 24806 CACCCATCGCCCCCGCACGGTCG-GGGGCTTTCT-CATGAGGAG-AGCACACACATGACC 24862
|||||| || | |||||| || ||||| |||| |||| | || || |||| ||||||
Sbjct 180 CACCCACCGGCTCCGCACACACGCGGGGCCTTCTTCATGTGAAGGAGAACACCCATGACT 121
Query 24863 GCAGATGCGCAGGGCAACGACCTCAGCGCCGTTGGCGTTCCGATCACGGGACGGGCGGCG 24922
|| ||| | ||||||||||||||| ||||||||||| |||||||| || || |||
Sbjct 120 GCCGATTCCCAGGGCAACGACCTCGAGGCCGTTGGCGTACCGATCACCGGCATCGCCGCG 61
Query 24923 TTCGCCCCGCTGGACCCGTCGAACGTCCTCACCAAGGCGCAGCTCGCCGCGCGCCCCCT 24981
||||| ||| | | | | |||||| || |||||| ||||| ||| |||||||
Sbjct 60 TTCGCGCCGGTCGCCGTGGAGAACGTGATCGACAAGGCCACGCTCGGAGCGAGCCCCCT 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147852002961090
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