Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq222699 111 3e-19
>seq222699
Length=2956
Score = 111 bits (122), Expect = 3e-19
Identities = 298/453 (66%), Gaps = 2/453 (0%)
Strand=Plus/Plus
Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGT 243345
|| ||||| ||||| |||||||||| | ||||| || || || | || ||||| ||
Sbjct 506 TCCTTTGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGCAGC 565
Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405
|||||| | || |||||||| ||| || ||||||| |||||| | || |||
Sbjct 566 TTCTGCTCGATATTTTGGCTAAAGAAGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAAC 625
Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAGCTTATGTATTCAAA 243464
|| |||| || || || || |||||| | |||| ||| || |||| ||
Sbjct 626 GAACTCATATCGCGAGATGAAGGGCTTCACTGCGACTTCGCGTGC-CTCTTGTACTCTCT 684
Query 243465 GCTCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAA 243524
||| || ||||| | ||| || || | || | ||||| ||||| |
Sbjct 685 CCTCAGGAGGAAGCTCACCGACGAGCGCGTGAAGGAGATTGTGCGCGAAGCGGTTGACAT 744
Query 243525 CGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACT 243584
|| | || || | |||||||| |||| || | | | || |||||| || ||
Sbjct 745 AGAGAGAGAGTTTGTGTGCGACGCGCTTCCCTGTGCGTTGGTGGGGATGAACGGGGAGCT 804
Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644
||| | || || || || || || || ||||| | | |||||||| | | |||
Sbjct 805 AATGAGTCAATATATTGAGTTTGTTGCGGACCGGTTGCTGGGTGCGCTTGGATGCGGGAA 864
Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704
|||||| |||| ||||||| || |||||||| || || || || || |||||
Sbjct 865 GGTGTACGGTGTTCAGAATCCCTTTGACTGGATGGAGCTTATATCTCTCCAGGGCAAAAC 924
Query 243705 TAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
||||||||| |||||||| || | || |||||
Sbjct 925 TAACTTCTTTGAAAAGCGCGTTGGGGACTATCA 957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1099714239827250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |