Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq205188 136 5e-27 seq222699 113 5e-20 >seq205188 Length=846 Score = 136 bits (150), Expect = 5e-27 Identities = 120/150 (80%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 |||||||||||||| |||||||||||||| || |||||| |||||||||||||| ||| Sbjct 1 TGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCTGGCATGAGGCCC 60 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || ||||| | |||||| || | ||||| || ||||||||||||||||| || || Sbjct 61 CGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCAACGCAG 120 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208 || || || | || ||||| || |||||| Sbjct 121 GCAAATGCGACGATGCGCTCGGCGAAGGAG 150 >seq222699 Length=2956 Score = 113 bits (124), Expect = 5e-20 Identities = 185/262 (71%), Gaps = 5/262 (2%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || || || || || || |||||||| || |||||| || || ||||| | || Sbjct 655 GTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATCAAGCC 596 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | ||| || |||| || || || ||||||||||||||||| || || Sbjct 595 GCGCTTCTTTAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCGACGCA 536 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 ||||| || | ||| ||||| ||||||||| || | | || | ||| || || Sbjct 535 GGCGAAGGCGACGAGGCGCTCGGCAAAGGAG-TCG--GTGGCATCGATCCAGCGCAAGGC 479 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 126297 ||| || ||||| || ||| ||| |||| ||| | | || || || | ||||| Sbjct 478 CCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCTACGGCGCGGAACAGGTGATTCTT 419 Query 126298 TTCTGATGGA-TCTTTGATGTA 126318 ||| | |||| ||||||||||| Sbjct 418 TTC-GGTGGAGTCTTTGATGTA 398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595680748577800