Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq205188 136 5e-27
seq222699 113 5e-20
>seq205188
Length=846
Score = 136 bits (150), Expect = 5e-27
Identities = 120/150 (80%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118
|||||||||||||| |||||||||||||| || |||||| |||||||||||||| |||
Sbjct 1 TGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCTGGCATGAGGCCC 60
Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178
|| ||||| | |||||| || | ||||| || ||||||||||||||||| || ||
Sbjct 61 CGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCAACGCAG 120
Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208
|| || || | || ||||| || ||||||
Sbjct 121 GCAAATGCGACGATGCGCTCGGCGAAGGAG 150
>seq222699
Length=2956
Score = 113 bits (124), Expect = 5e-20
Identities = 185/262 (71%), Gaps = 5/262 (2%)
Strand=Plus/Minus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| || || || || || || |||||||| || |||||| || || ||||| | ||
Sbjct 655 GTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATCAAGCC 596
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|||||||| | ||| || |||| || || || ||||||||||||||||| || ||
Sbjct 595 GCGCTTCTTTAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCGACGCA 536
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237
||||| || | ||| ||||| ||||||||| || | | || | ||| || ||
Sbjct 535 GGCGAAGGCGACGAGGCGCTCGGCAAAGGAG-TCG--GTGGCATCGATCCAGCGCAAGGC 479
Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 126297
||| || ||||| || ||| ||| |||| ||| | | || || || | |||||
Sbjct 478 CCATTGGGCCTTCTTGGCGACACAGGGGATGGTATCTACGGCGCGGAACAGGTGATTCTT 419
Query 126298 TTCTGATGGA-TCTTTGATGTA 126318
||| | |||| |||||||||||
Sbjct 418 TTC-GGTGGAGTCTTTGATGTA 398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595680748577800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |