Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq78941 214 9e-51 >seq78941 Length=653 Score = 214 bits (236), Expect = 9e-51 Identities = 234/311 (75%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 66024 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAA 66083 || ||||| | ||||| |||||| |||||| || | ||| || | ||||||||| || Sbjct 333 CTGCACGCCATCGCCAACGCCCAGCGGGCCGGCGGTATCGCGGCATTCATCGACGCGGAG 392 Query 66084 CATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTT 66143 ||| | |||||||| || ||||||||| |||||| || || ||||| || | || Sbjct 393 CATGCGCTCGACCCCGACTACGCCGCGAAGCTCGGCGTCGACATCGACGCCCTTCTCGTC 452 Query 66144 GTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGC 66203 |||||| ||||| || |||||||| || ||||||| ||| | ||||| || || Sbjct 453 TCGCAGCCCGACACGGGTGAGCAGGCTCTCGAGATCGCCGACATGCTCGTGCGCTCCGGT 512 Query 66204 GAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAA 66263 | | | ||||||| || ||||| |||||||||||||||||||| |||||| |||| Sbjct 513 GCCATCGACCTCATCGTCGTCGACTCGGTGGCGGCCCTGGTGCCGCGTGCGGAGATCGAG 572 Query 66264 GGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGC 66323 || || || || ||||| ||||| || || || |||||||| ||||| ||||| |||| Sbjct 573 GGCGAGATGGGAGACTCCCACGTGGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGG 632 Query 66324 AAGCTGACCGG 66334 ||||| ||||| Sbjct 633 AAGCTCACCGG 643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241808352379220