Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq65714 206 3e-48
seq122820 143 3e-29
>seq65714
Length=2341
Score = 206 bits (228), Expect = 3e-48
Identities = 173/212 (82%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994
|| ||||||||||||||| | ||||| |||||| ||||| |||||||| |||
Sbjct 212 GCGATCAACTGGAACCGCATCCAGGACGACAAGGACCTCGAGGTCTGGAACCGTCTGGTG 153
Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAG 156054
|||||||||||||||||||||||| | ||| |||| || ||||| ||||||||| || |
Sbjct 152 AACAACTTCTGGCTGCCGGAGAAGGTGCCGCTGTCGAACGACGTGCAGTCGTGGAACACG 93
Query 156055 CTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGAC 156114
|| ||| || |||| ||| |||||||||||||||||||||| || ||| | || |||
Sbjct 92 CTCACCCCCGACGAGCAGCTGCTCACCATGCGGGTGTTCACCGGGCTCACGCTCCTCGAC 33
Query 156115 ACCATCCAGGGCACCGTCGGCGCGGTCTCGCT 156146
|| ||||||||||||||||||||||| |||||
Sbjct 32 ACGATCCAGGGCACCGTCGGCGCGGTGTCGCT 1
>seq122820
Length=238
Score = 143 bits (158), Expect = 3e-29
Identities = 123/152 (81%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 153165 GAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATC 153224
|||||| | |||| |||||||||||||||||||||||| |||| || | ||| |||
Sbjct 157 GAGGCGAAGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGGCCTCATC 98
Query 153225 CGCGAGGGTGAGGGCGTGGGCTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAG 153284
||||||||||||||||||| | |||||||| || |||| ||||| || || | ||||
Sbjct 97 CGCGAGGGTGAGGGCGTGGCCGCTCAGGTGCTCGTCAAGCTGGGCGCCGACCTCAACAAG 38
Query 153285 GTCCGCCAGGTGGTCATCCAGCTGCTGTCCGG 153316
|| || ||| ||||||||||||||| |||||
Sbjct 37 GTGCGGCAGCAGGTCATCCAGCTGCTCTCCGG 6
Score = 134 bits (148), Expect = 1e-26
Identities = 118/147 (80%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944
||| |||||||||||||| ||||| |||||||| || ||||||||||||||| || ||
Sbjct 212 CATGTTCGAGAGATTCACGGACCGAGCCCGTCGAGTGGTCGTCCTCGCCCAAGAAGAGGC 153
Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGA 153004
| ||||||||||| ||||||||||||||||| | || ||||| || ||| |||
Sbjct 152 GAAGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGGCCTCATCCGCGA 93
Query 153005 GGGCGAGGGCGTAGCCGCCAAGGCGCT 153031
||| |||||||| ||||| ||| |||
Sbjct 92 GGGTGAGGGCGTGGCCGCTCAGGTGCT 66
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 525123694093200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |