Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq65714 206 3e-48 seq122820 143 3e-29 >seq65714 Length=2341 Score = 206 bits (228), Expect = 3e-48 Identities = 173/212 (82%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 155935 GCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGACC 155994 || ||||||||||||||| | ||||| |||||| ||||| |||||||| ||| Sbjct 212 GCGATCAACTGGAACCGCATCCAGGACGACAAGGACCTCGAGGTCTGGAACCGTCTGGTG 153 Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAG 156054 |||||||||||||||||||||||| | ||| |||| || ||||| ||||||||| || | Sbjct 152 AACAACTTCTGGCTGCCGGAGAAGGTGCCGCTGTCGAACGACGTGCAGTCGTGGAACACG 93 Query 156055 CTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGAC 156114 || ||| || |||| ||| |||||||||||||||||||||| || ||| | || ||| Sbjct 92 CTCACCCCCGACGAGCAGCTGCTCACCATGCGGGTGTTCACCGGGCTCACGCTCCTCGAC 33 Query 156115 ACCATCCAGGGCACCGTCGGCGCGGTCTCGCT 156146 || ||||||||||||||||||||||| ||||| Sbjct 32 ACGATCCAGGGCACCGTCGGCGCGGTGTCGCT 1 >seq122820 Length=238 Score = 143 bits (158), Expect = 3e-29 Identities = 123/152 (81%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 153165 GAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATC 153224 |||||| | |||| |||||||||||||||||||||||| |||| || | ||| ||| Sbjct 157 GAGGCGAAGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGGCCTCATC 98 Query 153225 CGCGAGGGTGAGGGCGTGGGCTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAG 153284 ||||||||||||||||||| | |||||||| || |||| ||||| || || | |||| Sbjct 97 CGCGAGGGTGAGGGCGTGGCCGCTCAGGTGCTCGTCAAGCTGGGCGCCGACCTCAACAAG 38 Query 153285 GTCCGCCAGGTGGTCATCCAGCTGCTGTCCGG 153316 || || ||| ||||||||||||||| ||||| Sbjct 37 GTGCGGCAGCAGGTCATCCAGCTGCTCTCCGG 6 Score = 134 bits (148), Expect = 1e-26 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944 ||| |||||||||||||| ||||| |||||||| || ||||||||||||||| || || Sbjct 212 CATGTTCGAGAGATTCACGGACCGAGCCCGTCGAGTGGTCGTCCTCGCCCAAGAAGAGGC 153 Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGA 153004 | ||||||||||| ||||||||||||||||| | || ||||| || ||| ||| Sbjct 152 GAAGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGGCCTCATCCGCGA 93 Query 153005 GGGCGAGGGCGTAGCCGCCAAGGCGCT 153031 ||| |||||||| ||||| ||| ||| Sbjct 92 GGGTGAGGGCGTGGCCGCTCAGGTGCT 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525123694093200