Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_013055.1
Length=39896
Score E
Sequences producing significant alignments: (Bits) Value
seq61441 113 1e-20
>seq61441
Length=859
Score = 113 bits (124), Expect = 1e-20
Identities = 184/262 (70%), Gaps = 5/262 (2%)
Strand=Plus/Plus
Query 8866 CTCAAACAAATTGCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGA 8925
||||| | || || ||||| || | || ||| ||||||||||||||||||| || ||
Sbjct 550 CTCAAGCTCATCGCCAAGGAGCTGCAGGTGCCGGTCATCGCGCTGTCGCAGCTGAACCGT 609
Query 8926 GGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCG 8985
|| | |||| | |||| ||||| ||||| || ||| ||||| ||||| || ||
Sbjct 610 GGTCCCGAGCAGCGCCAGGACAAGAAGCCCGCGATCAGCGACCTGCGAGAGTCCGGATCG 669
Query 8986 ATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGAC 9045
||||||||||| |||||| || || || | | ||||||| |||||| || ||
Sbjct 670 ATCGAGCAGGACGCCGACATGGTCATCCTGCTGCACCGCGACTCGGTCTACGACAAGGA- 728
Query 9046 AGCGCAGATCGCGGTACGGCCGAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGC 9105
|| || ||| |||||| ||||| | || ||||| || ||||| |||| |
Sbjct 729 --CGTCCGTCCCGGCGAGGCCGACCTCATCGTGGCCAAGCATCGTAACGGTCCGACCGCG 786
Query 9106 ACCGT-ACGGCTCGCATTCCAG 9126
||| | || | |||| ||||||
Sbjct 787 ACCATCACCG-TCGCCTTCCAG 807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127206275692860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |