Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 288 1e-72
seq95291 259 6e-64
seq13836 114 2e-20
seq78999 105 8e-18
seq221580 102 1e-16
seq32149 93.3 5e-14
seq55772 91.5 2e-13
>seq80997
Length=4773
Score = 288 bits (318), Expect = 1e-72
Identities = 332/441 (75%), Gaps = 6/441 (1%)
Strand=Plus/Minus
Query 8083 AGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGAT 8142
|||||||| | ||| |||| || || || |||| |||| | ||||| ||| ||
Sbjct 4773 AGGATAGATCAAGAAAACAGTAGTAGCGGCTACAACAAGAGCTAAATATGCAACAGCAAT 4714
Query 8143 CCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTATGCATAGAT 8202
||| ||||||||||| ||||| || |||||||||||||||||||||||| ||| || |
Sbjct 4713 CCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA-GCA-AGCT 4656
Query 8203 AC--CGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAGCCACTCA 8260
|| | | | |||||| | | || |||| ||||||| |||||||| | |||||||
Sbjct 4655 ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCACTCA 4596
Query 8261 TCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAAGAAGGA 8320
|||| |||||||||||||||||| ||||| || || | ||| ||||| ||||| ||||
Sbjct 4595 TCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGA 4536
Query 8321 ACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGGTTCACGG 8380
| || |||||||| ||||| ||||| ||||| | || || |||| || || |||||
Sbjct 4535 ATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACGA 4476
Query 8381 ATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAATAGCAGC 8439
|| || ||||| || || ||||| ||||||| ||||||| || || ||| | || ||
Sbjct 4475 ATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGA-AGTTGC 4417
Query 8440 AGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGATTGTTGGT 8499
|| | | ||||||||||||| ||||| ||||| || | || |||||||| | |||
Sbjct 4416 AGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCGGT 4357
Query 8500 GGAGGTTACCCAGTTACAGAA 8520
| ||||| ||| ||||||||
Sbjct 4356 GCTGGTTATCCAATTACAGAA 4336
>seq95291
Length=6073
Score = 259 bits (286), Expect = 6e-64
Identities = 309/413 (75%), Gaps = 6/413 (1%)
Strand=Plus/Plus
Query 8120 GGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCAC 8179
||||| || ||||| ||| ||||| ||||||||||| ||||| || ||||||||||
Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720
Query 8180 TCACGACCCATGTATGCATAG--ATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAG 8237
|||||||||||||| ||| || | ||| | | |||||| | | || |||| |||
Sbjct 5721 TCACGACCCATGTA-GCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAG 5778
Query 8238 GACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGA 8297
|||| |||||||| | ||||||||||| |||||||||||||||||| ||||| || || |
Sbjct 5779 GACCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCA 5838
Query 8298 GACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGA 8357
||| ||||| ||||| ||||| || |||||| | ||||| ||||| ||||| | |
Sbjct 5839 AACCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTA 5898
Query 8358 GCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAG 8417
| || |||| || | ||||| || || ||||| || || ||||| ||||||| ||||
Sbjct 5899 GAGATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAG 5958
Query 8418 CGACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAA 8476
||| || || ||| | | |||| | | ||||||||||||| ||| | |||||
Sbjct 5959 CGATAATAAATACAGA-ATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCAT 6017
Query 8477 CCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTTACAGAATTGTTCCCA 8529
|| | || |||||||| | | || ||||| ||| |||||||| || ||||
Sbjct 6018 CCAATGTAAAGACGATTTTCGATGTTGGTTATCCAATTACAGAAGTGACCCCA 6070
>seq13836
Length=10167
Score = 114 bits (126), Expect = 2e-20
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 6806 GGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACA 6865
|| ||||||||||||| ||||| || || ||||| || || || ||| | ||||| |||
Sbjct 4660 GGAGCAAAGAACCAACCAGACTGACCCAGTGGATAAATAAGGAATACAAAAACAAAAACA 4601
Query 6866 GCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGCGAT 6924
||||| ||||| || || ||| ||||||| || || || | | || ||| || || |
Sbjct 4600 GCAATTGGACCTGAGAATGCGGTTGCATTATAAGGTCGCA-ATTGAACAGATCGAGCAAG 4542
Query 6925 CTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAAAGG 6984
||||| || || | |||||| ||||| | | || || |||||||| || |||||||
Sbjct 4541 TTCAAATTGACGTAACATGAACCCTATTAATCCGAAAGCACCGTGGAGAGCAACAAAAGT 4482
Query 6985 CCATAGTCCCCC 6996
||| || || ||
Sbjct 4481 CCACAGACCGCC 4470
>seq78999
Length=659
Score = 105 bits (116), Expect = 8e-18
Identities = 211/310 (68%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||| ||| || ||| | || |||| || |||| || ||||||||| | | |||
Sbjct 16 AGAGTGTTTCCATGTGGTAGAACCTCTTTAGCGAATATAAGGTTTTCATGAAGCTAATCT 75
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| ||||||| |||| | |||||| || || | || | ||||| ||||| |||
Sbjct 76 TGAACTCCCATCCACCCACGAATACCTTCGTTTAAGAAAATACTTTTGGTGTAGAAAGTC 135
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || | ||||| || ||| | | || |||| ||||||||||||||||| | |||
Sbjct 136 TCAAA-TAAGGATCTTCTGCTCCACGAATTTCTTTAGAAACAAAGTCATAAGCACGTAGG 194
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| || || | || || | |||| || | ||| | ||| | || || |||||
Sbjct 195 TTTAGGGCCAAACTAACTACCCCAAAAGTAATGATCCGTAAACCAGTTACTGGTACAAAT 254
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562
| |||| || || ||| ||||| |||||| ||| || | |||||| | |||||
Sbjct 255 AACATACAG-AACGTAACCAACATTTATTGAAGAAAGCAACCTTAAAGATTTATGACCAA 313
Query 6563 AAACGATTAG 6572
|| |||||||
Sbjct 314 AAGCGATTAG 323
>seq221580
Length=2368
Score = 102 bits (112), Expect = 1e-16
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 10210 AGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGTC 10269
|| || ||||| |||| | | || ||||||||| || || || || ||||| ||
Sbjct 1802 AGATCTTCCTCCTTGTGGGTGTAAATCACACAATCTGATGTCGGGTATGAGACACATGTG 1743
Query 10270 AGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGATCTACC 10329
|||||| |||| || ||||| | || ||||| || |||||||| ||||| ||
Sbjct 1742 AGAAGGTAACCTTTCTCTATCTGCTGTTCTTCAAGAAAAGATTGATCTGACTGATCCACA 1683
Query 10330 GTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAGTTG 10389
| ||| || ||| | || |||||| | || || || ||||||| ||| |||||
Sbjct 1682 GCACCTGAATCCAGTCTTCCAGCACAAGTAGAGCATGCTCCAGCTCTGCATGAGTATGGT 1623
Query 10390 AGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGT-ACTGATCGTCAG 10438
|| || | || || |||||||| | ||||||||||| |||| || ||||
Sbjct 1622 AGTTCCAATCCAGCCTCTTCAGCTGAATCCAGAATGTAACTG-TCATCAG 1574
>seq32149
Length=26709
Score = 93.3 bits (102), Expect = 5e-14
Identities = 154/221 (70%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 10210 AGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGTC 10269
|| |||||||| |||| ||| | ||| |||| || || ||| ||| |||||
Sbjct 13891 AGCTCATCCTCCTTGTGGGTCTGGATGACAAGATCGGAGGTTGGGAAAGCAACGCAGGTG 13950
Query 10270 AGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTT---TGATCT 10326
|||| || || ||||| |||||||| ||||||||||| | | || | || ||
Sbjct 13951 AGAACAAAGCCTGCATCAATCTGGTCGTCATCAAGGAAG---TTACCGTCTGACTGGTCG 14007
Query 10327 ACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAG 10386
|| || |||| | |||| | || || || || | |||||| | ||| ||||||
Sbjct 14008 ACTTGGCCGGAGACAATTTTGGCGGCGCAGGAAGAGCAAGAACCAGCCCTGCATGAGTAG 14067
Query 10387 TTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427
|||||||||||| ||||||| |||||||| |||| |||
Sbjct 14068 GGAAGGTCAATGCCTACTTCTTCTGCAGCATCAAGAACGTA 14108
>seq55772
Length=6464
Score = 91.5 bits (100), Expect = 2e-13
Identities = 155/225 (69%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 10203 TCAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAAC 10262
|||||| ||||| | || |||| | | |||| |||||||| || ||||| || ||
Sbjct 1144 TCAGTAGAGTTCTCCTTCCTTGTGAGTTTCAATTACACAATCTGCAGTTGGATAGGAGAC 1203
Query 10263 ACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTG 10322
|||||| || || || || | | || ||| ||||||||||| || ||| ||
Sbjct 1204 ACAGGTAAGTAGAAATCCTTCTCCCATTTGGGTGTCATCAAGGAATGAGCCATCAGACTG 1263
Query 10323 ATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGA 10382
||| || | ||| || | | || || ||||| | || || || || || ||||||||
Sbjct 1264 ATCCACTGAACCAGAAACAATCTTCCCAGCACAGGTAGAGCATGCTCCGGCGCGGCACGA 1323
Query 10383 GTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427
||| || |||| || || || || || ||||| ||||||||
Sbjct 1324 GTAAGGAAGTTCAACTCCAGCATCCTCTGCTGCATCTAGAATGTA 1368
Score = 86.0 bits (94), Expect = 8e-12
Identities = 154/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 10203 TCAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAAC 10262
|||||| ||||| | || |||| | | |||| |||||||| || ||||| || ||
Sbjct 3612 TCAGTAGAGTTCTCCTTCCTTGTGAGTTTCAATTACACAATCTGCAGTTGGATAGGAGAC 3671
Query 10263 ACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTG 10322
|||||| || || || || | | || ||| ||||||||||| || ||| ||
Sbjct 3672 ACAGGTAAGTAGAAATCCTTCTCCCATTTGGGTGTCATCAAGGAATGAGCCATCAGACTG 3731
Query 10323 ATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGA 10382
||| | | ||| || | | || || ||||| | || || || || || ||||||||
Sbjct 3732 ATCCAATGAACCAGATACAATCTTCCCAGCACAGGTAGAGCATGCTCCGGCGCGGCACGA 3791
Query 10383 GTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427
||| || |||| || || || || || ||||| ||||||||
Sbjct 3792 GTAAGGAAGTTCAACTCCAGCATCCTCTGCTGCATCTAGAATGTA 3836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620382578380400
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