Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq80997 288 1e-72 seq95291 259 6e-64 seq13836 114 2e-20 seq78999 105 8e-18 seq221580 102 1e-16 seq32149 93.3 5e-14 seq55772 91.5 2e-13 >seq80997 Length=4773 Score = 288 bits (318), Expect = 1e-72 Identities = 332/441 (75%), Gaps = 6/441 (1%) Strand=Plus/Minus Query 8083 AGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGAT 8142 |||||||| | ||| |||| || || || |||| |||| | ||||| ||| || Sbjct 4773 AGGATAGATCAAGAAAACAGTAGTAGCGGCTACAACAAGAGCTAAATATGCAACAGCAAT 4714 Query 8143 CCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTATGCATAGAT 8202 ||| ||||||||||| ||||| || |||||||||||||||||||||||| ||| || | Sbjct 4713 CCAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA-GCA-AGCT 4656 Query 8203 AC--CGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAGCCACTCA 8260 || | | | |||||| | | || |||| ||||||| |||||||| | ||||||| Sbjct 4655 ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCACTCA 4596 Query 8261 TCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAAGAAGGA 8320 |||| |||||||||||||||||| ||||| || || | ||| ||||| ||||| |||| Sbjct 4595 TCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGA 4536 Query 8321 ACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGGTTCACGG 8380 | || |||||||| ||||| ||||| ||||| | || || |||| || || ||||| Sbjct 4535 ATAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACGA 4476 Query 8381 ATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAATAGCAGC 8439 || || ||||| || || ||||| ||||||| ||||||| || || ||| | || || Sbjct 4475 ATACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGA-AGTTGC 4417 Query 8440 AGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGATTGTTGGT 8499 || | | ||||||||||||| ||||| ||||| || | || |||||||| | ||| Sbjct 4416 AGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATTTTCGGT 4357 Query 8500 GGAGGTTACCCAGTTACAGAA 8520 | ||||| ||| |||||||| Sbjct 4356 GCTGGTTATCCAATTACAGAA 4336 >seq95291 Length=6073 Score = 259 bits (286), Expect = 6e-64 Identities = 309/413 (75%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 8120 GGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCAC 8179 ||||| || ||||| ||| ||||| ||||||||||| ||||| || |||||||||| Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720 Query 8180 TCACGACCCATGTATGCATAG--ATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAG 8237 |||||||||||||| ||| || | ||| | | |||||| | | || |||| ||| Sbjct 5721 TCACGACCCATGTA-GCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAG 5778 Query 8238 GACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGA 8297 |||| |||||||| | ||||||||||| |||||||||||||||||| ||||| || || | Sbjct 5779 GACCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCA 5838 Query 8298 GACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGA 8357 ||| ||||| ||||| ||||| || |||||| | ||||| ||||| ||||| | | Sbjct 5839 AACCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTA 5898 Query 8358 GCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAG 8417 | || |||| || | ||||| || || ||||| || || ||||| ||||||| |||| Sbjct 5899 GAGATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAG 5958 Query 8418 CGACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAA 8476 ||| || || ||| | | |||| | | ||||||||||||| ||| | ||||| Sbjct 5959 CGATAATAAATACAGA-ATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCAT 6017 Query 8477 CCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTTACAGAATTGTTCCCA 8529 || | || |||||||| | | || ||||| ||| |||||||| || |||| Sbjct 6018 CCAATGTAAAGACGATTTTCGATGTTGGTTATCCAATTACAGAAGTGACCCCA 6070 >seq13836 Length=10167 Score = 114 bits (126), Expect = 2e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 6806 GGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACA 6865 || ||||||||||||| ||||| || || ||||| || || || ||| | ||||| ||| Sbjct 4660 GGAGCAAAGAACCAACCAGACTGACCCAGTGGATAAATAAGGAATACAAAAACAAAAACA 4601 Query 6866 GCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGCGAT 6924 ||||| ||||| || || ||| ||||||| || || || | | || ||| || || | Sbjct 4600 GCAATTGGACCTGAGAATGCGGTTGCATTATAAGGTCGCA-ATTGAACAGATCGAGCAAG 4542 Query 6925 CTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAAAGG 6984 ||||| || || | |||||| ||||| | | || || |||||||| || ||||||| Sbjct 4541 TTCAAATTGACGTAACATGAACCCTATTAATCCGAAAGCACCGTGGAGAGCAACAAAAGT 4482 Query 6985 CCATAGTCCCCC 6996 ||| || || || Sbjct 4481 CCACAGACCGCC 4470 >seq78999 Length=659 Score = 105 bits (116), Expect = 8e-18 Identities = 211/310 (68%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||| ||| || ||| | || |||| || |||| || ||||||||| | | ||| Sbjct 16 AGAGTGTTTCCATGTGGTAGAACCTCTTTAGCGAATATAAGGTTTTCATGAAGCTAATCT 75 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||| |||| | |||||| || || | || | ||||| ||||| ||| Sbjct 76 TGAACTCCCATCCACCCACGAATACCTTCGTTTAAGAAAATACTTTTGGTGTAGAAAGTC 135 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || | ||||| || ||| | | || |||| ||||||||||||||||| | ||| Sbjct 136 TCAAA-TAAGGATCTTCTGCTCCACGAATTTCTTTAGAAACAAAGTCATAAGCACGTAGG 194 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || | || || | |||| || | ||| | ||| | || || ||||| Sbjct 195 TTTAGGGCCAAACTAACTACCCCAAAAGTAATGATCCGTAAACCAGTTACTGGTACAAAT 254 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||| || || ||| ||||| |||||| ||| || | |||||| | ||||| Sbjct 255 AACATACAG-AACGTAACCAACATTTATTGAAGAAAGCAACCTTAAAGATTTATGACCAA 313 Query 6563 AAACGATTAG 6572 || ||||||| Sbjct 314 AAGCGATTAG 323 >seq221580 Length=2368 Score = 102 bits (112), Expect = 1e-16 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 10210 AGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGTC 10269 || || ||||| |||| | | || ||||||||| || || || || ||||| || Sbjct 1802 AGATCTTCCTCCTTGTGGGTGTAAATCACACAATCTGATGTCGGGTATGAGACACATGTG 1743 Query 10270 AGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGATCTACC 10329 |||||| |||| || ||||| | || ||||| || |||||||| ||||| || Sbjct 1742 AGAAGGTAACCTTTCTCTATCTGCTGTTCTTCAAGAAAAGATTGATCTGACTGATCCACA 1683 Query 10330 GTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAGTTG 10389 | ||| || ||| | || |||||| | || || || ||||||| ||| ||||| Sbjct 1682 GCACCTGAATCCAGTCTTCCAGCACAAGTAGAGCATGCTCCAGCTCTGCATGAGTATGGT 1623 Query 10390 AGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGT-ACTGATCGTCAG 10438 || || | || || |||||||| | ||||||||||| |||| || |||| Sbjct 1622 AGTTCCAATCCAGCCTCTTCAGCTGAATCCAGAATGTAACTG-TCATCAG 1574 >seq32149 Length=26709 Score = 93.3 bits (102), Expect = 5e-14 Identities = 154/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 10210 AGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGTC 10269 || |||||||| |||| ||| | ||| |||| || || ||| ||| ||||| Sbjct 13891 AGCTCATCCTCCTTGTGGGTCTGGATGACAAGATCGGAGGTTGGGAAAGCAACGCAGGTG 13950 Query 10270 AGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTT---TGATCT 10326 |||| || || ||||| |||||||| ||||||||||| | | || | || || Sbjct 13951 AGAACAAAGCCTGCATCAATCTGGTCGTCATCAAGGAAG---TTACCGTCTGACTGGTCG 14007 Query 10327 ACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAG 10386 || || |||| | |||| | || || || || | |||||| | ||| |||||| Sbjct 14008 ACTTGGCCGGAGACAATTTTGGCGGCGCAGGAAGAGCAAGAACCAGCCCTGCATGAGTAG 14067 Query 10387 TTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427 |||||||||||| ||||||| |||||||| |||| ||| Sbjct 14068 GGAAGGTCAATGCCTACTTCTTCTGCAGCATCAAGAACGTA 14108 >seq55772 Length=6464 Score = 91.5 bits (100), Expect = 2e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 10203 TCAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAAC 10262 |||||| ||||| | || |||| | | |||| |||||||| || ||||| || || Sbjct 1144 TCAGTAGAGTTCTCCTTCCTTGTGAGTTTCAATTACACAATCTGCAGTTGGATAGGAGAC 1203 Query 10263 ACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTG 10322 |||||| || || || || | | || ||| ||||||||||| || ||| || Sbjct 1204 ACAGGTAAGTAGAAATCCTTCTCCCATTTGGGTGTCATCAAGGAATGAGCCATCAGACTG 1263 Query 10323 ATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGA 10382 ||| || | ||| || | | || || ||||| | || || || || || |||||||| Sbjct 1264 ATCCACTGAACCAGAAACAATCTTCCCAGCACAGGTAGAGCATGCTCCGGCGCGGCACGA 1323 Query 10383 GTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427 ||| || |||| || || || || || ||||| |||||||| Sbjct 1324 GTAAGGAAGTTCAACTCCAGCATCCTCTGCTGCATCTAGAATGTA 1368 Score = 86.0 bits (94), Expect = 8e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 10203 TCAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAAC 10262 |||||| ||||| | || |||| | | |||| |||||||| || ||||| || || Sbjct 3612 TCAGTAGAGTTCTCCTTCCTTGTGAGTTTCAATTACACAATCTGCAGTTGGATAGGAGAC 3671 Query 10263 ACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTG 10322 |||||| || || || || | | || ||| ||||||||||| || ||| || Sbjct 3672 ACAGGTAAGTAGAAATCCTTCTCCCATTTGGGTGTCATCAAGGAATGAGCCATCAGACTG 3731 Query 10323 ATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGA 10382 ||| | | ||| || | | || || ||||| | || || || || || |||||||| Sbjct 3732 ATCCAATGAACCAGATACAATCTTCCCAGCACAGGTAGAGCATGCTCCGGCGCGGCACGA 3791 Query 10383 GTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTA 10427 ||| || |||| || || || || || ||||| |||||||| Sbjct 3792 GTAAGGAAGTTCAACTCCAGCATCCTCTGCTGCATCTAGAATGTA 3836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620382578380400