Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq222699 168 1e-36
>seq222699
Length=2956
Score = 168 bits (186), Expect = 1e-36
Identities = 524/802 (65%), Gaps = 23/802 (3%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||| || || ||||| || ||||||| | ||||| ||||| | | || || ||
Sbjct 940 CTTTTCAAAGAAGTTAGTTTTGCCCTGGAGAGATATAAGCTCCATCCAGTCAAAGGGATT 881
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
|| || || |||| |||| || || ||||||||| ||| || ||||| ||
Sbjct 880 CTGAACACCGTACACCTTCCCGCATCCAAGCGCACCCAGCAACCGGTCCGCAACAAACTC 821
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|| || || ||| |||| | ||| ||||||| || | | ||| ||||| || |
Sbjct 820 AATATATTGACTCATTAGCTCCCCGTTCATCCCCACCAACGCACAGGGAAGCGCGTCGCA 761
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888
|| |||||| |||| || || ||||||||| |||||||| | || || ||||
Sbjct 760 CACAAACTCTCTCTCTATGTCAACCGCTTCGCGCACAATCTCCTTCACGCGCTCGTCGGT 701
Query 159889 CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948
|||| | | | | | | ||| ||||||||| ||||||||||| || || ||
Sbjct 700 GAGCTTCCTCCTGAGGAGAGAGT---ACAAGAGGCACGCGAAGTCGCAGTGAAGCCCTTC 644
Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008
|| || || |||| |||||||| | | ||||||| ||||| | || ||| || ||
Sbjct 643 ATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATCAAGCCGCGCTTCTTTAG 584
Query 160009 CCAAAAAATGGCCGCAAAAGC-ACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCA 160067
|||||| || | ||| |||| ||| || ||||| ||||| ||| || || || |
Sbjct 583 CCAAAATATCG-AGCAGAAGCTGCCGGAGAAGAAGATTCCCTCGACGCAGGCGAAGGCGA 525
Query 160068 CGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCT 160127
|||| | ||| ||| ||| || |||| ||| | |||| | |||||||| ||||
Sbjct 524 CGAGGCGCTCGGCAA---AGGAGTCGGTGGCATCGATCCAGCGCAAGGCCCATTGGGCCT 468
Query 160128 TCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACAT 160187
|||| |||| || || ||| || |||||| |||| | || || | |
Sbjct 467 TCTTGGCGACACAGGGGATGGTATCTACGGCGCGGAACAGGTGATTCTTTTCGGTGGAGT 408
Query 160188 CCTTGATCAGAGTAGCAATC--AGCTTCGA--GTACATTTCTGCGTGCACATTTTCGATG 160243
| ||||| |||| || || || |||||| || | ||| | || ||||||
Sbjct 407 CTTTGAT----GTAGGTTTCCAAGAGGAGACTGTACATCTCGGAGTGGATGTTCTCGATG 352
Query 160244 GCCATCTGAAAGTTGTAGAAATATGTCGCCTC--CAGATACTGCACCTCCTGTGTGAACC 160301
|| ||||| ||| ||||||| ||||| | | | || | |||| |||| |
Sbjct 351 GCGATCTGGAAGCCGTAGAAAGCACGGGCCTCGGCGGCT--TGGATTTCCTTCATGAAGC 294
Query 160302 TTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAG 160361
| || || | ||| | ||||||| ||| |||||||| || | ||||| |
Sbjct 293 GGGCGGCGAGGTTTTCGAGAACGATGCCGTCGGAGGCGGCAAAGAAGGCGAGGACGTGGG 234
Query 160362 AGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCA 160421
|||||| | | |||| | | | |||| |||||||| | |||||||| |
Sbjct 233 TGATGAAGTAGCGCTCGCCGTCGGTGAG---GGAGTCCCAGTGGCGGAGGTCTTGGGAAA 177
Query 160422 AATCAACCTCTTCCGCGCTCCA 160443
|||||||||||| ||| ||||
Sbjct 176 GATCAACCTCTTCGGCGGTCCA 155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 792928417559600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |