Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq205188 138 1e-27 seq222699 113 6e-20 seq217650 107 2e-18 seq64330 107 2e-18 seq12236 107 2e-18 seq25689 87.8 2e-12 seq177272 82.4 9e-11 >seq205188 Length=846 Score = 138 bits (152), Expect = 1e-27 Identities = 120/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||| || |||||||||| || |||||||| ||||||||||| || | Sbjct 149 TCCTTCGCCGAGCGCATCGTCGCATTTGCCTGCGTTGAGGGAATCTTCTTCTCCGGAAGC 90 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || ||| | || | ||||||||||| || || ||||||||||| ||| |||||||||| Sbjct 89 TTTTGCTCCATCTTCTGGCTCAAGAAACGGGGCCTCATGCCAGGACTCACCTTCTCCAAC 30 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCA 102319 || || ||||| || |||||||| ||||| Sbjct 29 GAACTCATCTCCCGCGACGAGGGTCTCCA 1 >seq222699 Length=2956 Score = 113 bits (124), Expect = 6e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 |||||||| ||||| ||| |||| || || || || ||||| ||||||||||| || | Sbjct 506 TCCTTTGCCGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCCGGCAGC 565 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||| | || | |||||| |||||||| || | ||||| || ||| |||||||||| Sbjct 566 TTCTGCTCGATATTTTGGCTAAAGAAGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAAC 625 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 || || || || || || || || || ||| Sbjct 626 GAACTCATATCGCGAGATGAAGGGCTTCAC 655 >seq217650 Length=1534 Score = 107 bits (118), Expect = 2e-18 Identities = 251/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 16031 ||| ||||||||||| |||| |||||||||||| || ||||||| ||||| || | | Sbjct 1178 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 1119 Query 16032 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 || | || || | | ||| | |||||||| ||||||||||||||||| || ||| Sbjct 1118 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 1061 Query 16092 CATGGT---TGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 16147 || ||| | ||| ||||| | ||||| | ||||| || | | || || || Sbjct 1060 CACGGTGCCTTATTCTTCGCCTTC----TCAAACAAATCCCTCACCCTCGACGCACCAAC 1005 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207 || ||||||| |||||| || | | || | || || || || ||| | ||| Sbjct 1004 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACACCCGCTTC 945 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 || || | || | || ||||| ||||| || || || || ||| | | || | | Sbjct 944 CCCAGCCACAGCCCTAGCCAGAAGCGTCTTCCCGGTTCCCGGTGGTCCCACCA-GAAGAC 886 Query 16268 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 16326 ||| | | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 885 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 826 Query 16327 CAATCTCTTCCA 16338 ||| ||||| || Sbjct 825 CAACCTCTTGCA 814 >seq64330 Length=14123 Score = 107 bits (118), Expect = 2e-18 Identities = 251/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Plus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 16031 ||| ||||||||||| |||| |||||||||||| || ||||||| ||||| || | | Sbjct 8587 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 8646 Query 16032 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 || | || || | | ||| | |||||||| ||||||||||||||||| || ||| Sbjct 8647 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 8704 Query 16092 CATGGT---TGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 16147 || ||| | ||| ||||| | ||||| | ||||| || | | || || || Sbjct 8705 CACGGTGCCTTATTCTTCGCCTTC----TCAAACAAATCCCTCACCCTCGACGCACCAAC 8760 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 16207 || ||||||| |||||| || | | || | || || || || ||| | ||| Sbjct 8761 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACACCCGCTTC 8820 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 || || | || | || ||||| ||||| || || || || ||| | | || | | Sbjct 8821 CCCAGCCACAGCCCTAGCCAGAAGCGTCTTCCCGGTTCCCGGTGGTCCCACCA-GAAGAC 8879 Query 16268 ACCTCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 16326 ||| | | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 8880 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 8939 Query 16327 CAATCTCTTCCA 16338 ||| ||||| || Sbjct 8940 CAACCTCTTGCA 8951 >seq12236 Length=17685 Score = 107 bits (118), Expect = 2e-18 Identities = 304/461 (66%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || || | | || ||||| || ||||||| || || || | |||||| Sbjct 12101 TCAAGAATGTCTGCTCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 12042 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | || || || | |||||||||| || | Sbjct 12041 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 11985 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | | || |||| || |||||||| ||||||| ||||| ||||| Sbjct 11984 CCAATTCCAGTTCCTCTCTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 11925 Query 16095 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || | ||| | | |||| || | ||| || || || || || ||||||| Sbjct 11924 GG--GGCGTTCTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAA 11867 Query 16153 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 16211 |||||||||| ||||| | | | | | |||| | || || ||| || |||||| Sbjct 11866 CAAACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAATGGAACACCAGCTTCACCA 11808 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 ||||| || ||| | || ||||| || || ||||| ||| | || || | ||| Sbjct 11807 GCAATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 11748 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 || || || ||| || | | |||||||| | ||| ||||| ||||| | | Sbjct 11747 TTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACC 11688 Query 16332 TCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 || || || | ||||| | || | ||| ||||||| Sbjct 11687 TCCATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 11647 Score = 107 bits (118), Expect = 2e-18 Identities = 304/461 (66%), Gaps = 12/461 (3%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || || | | || ||||| || ||||||| || || || | |||||| Sbjct 15970 TCAAGAATGTCTGCTCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 15911 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | || || || | |||||||||| || | Sbjct 15910 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 15854 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | | || |||| || |||||||| ||||||| ||||| ||||| Sbjct 15853 CCAATTCCAGTTCCTCTCTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 15794 Query 16095 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || | ||| | | |||| || | ||| || || || || || ||||||| Sbjct 15793 GG--GGCGTTCTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAA 15736 Query 16153 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 16211 |||||||||| ||||| | | | | | |||| | || || ||| || |||||| Sbjct 15735 CAAACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAATGGAACACCAGCTTCACCA 15677 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 ||||| || ||| | || ||||| || || ||||| ||| | || || | ||| Sbjct 15676 GCAATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 15617 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 || || || ||| || | | |||||||| | ||| ||||| ||||| | | Sbjct 15616 TTAGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACC 15557 Query 16332 TCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 || || || | ||||| | || | ||| ||||||| Sbjct 15556 TCCATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 15516 >seq25689 Length=4009 Score = 87.8 bits (96), Expect = 2e-12 Identities = 193/285 (68%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 16052 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 16111 |||| |||| || |||||||| ||||||| || || |||||||| ||| || || Sbjct 4002 TTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCATGGAGCATTCTCTTTGGC 3943 Query 16112 GACTTCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAG 16169 |||| || | ||| || || || || || ||||||||||||||||||||||| Sbjct 3942 --CTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCAACAAACATCTCCACAAAC 3885 Query 16170 TTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAG 16228 | | | | | |||| || || |||||| | |||||| ||||| || || | Sbjct 3884 TCAGAACCTG-AGATTGAGAAAAATGGGACACCTGCTTCACCTGCAATAGCCTTTGCTAA 3826 Query 16229 AAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||| ||||| || || || || ||| | || || ||||| ||| || || || Sbjct 3825 AAGTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACCTTTTGGTATGCGAGCCCC 3766 Query 16289 ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 | || | |||||||||| | |||||||| ||||| | ||| Sbjct 3765 AACAGCAGTGAATCTCTCAGGCTTTTTAAGAAATTCCACCACCTC 3721 >seq177272 Length=479 Score = 82.4 bits (90), Expect = 9e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 15917 ATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAA 15976 |||||| || ||| | | || || || || ||||||| ||||| || | ||||| Sbjct 353 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCGGTATTACCCTCAAA 412 Query 15977 ACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 16031 |||||||| ||||||||||| ||||||| || ||||| | |||||||||| || Sbjct 413 TCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTCTGTTCTCTTTCATCATTCCCT 467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619004049705200