Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq205188 122 1e-22
seq222699 102 1e-16
seq66610 84.2 3e-11
>seq205188
Length=846
Score = 122 bits (134), Expect = 1e-22
Identities = 142/189 (75%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || || || || |||||||| || || |||| ||||| |||||||| ||
Sbjct 1 TGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCTGGCATGAGGCCC 60
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| |||||| ||||| ||||||| ||||| ||||| || |||||||| ||||| || |||
Sbjct 61 CGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCAACGCAG 120
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTCGAACCACTTGAGAGCCCA 119686
|| || |||| | ||||| || || | |||| || ||||| ||| ||| |||||
Sbjct 121 GCAAATGCGACGATGCGCTCGGCGAAGGAGTCG-GAAGAGTCGATCCAGCGGAGGGCCCA 179
Query 119687 GTTGGCCTT 119695
|||||||||
Sbjct 180 GTTGGCCTT 188
>seq222699
Length=2956
Score = 102 bits (112), Expect = 1e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|||||||||||||| || || ||||| || || |||| || || ||||| | ||
Sbjct 654 TGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATCAAGCCG 595
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| |||||||||||||| || | || || || || || |||||||| ||||| || |||
Sbjct 594 CGCTTCTTTAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCGACGCAG 535
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAA 119653
||||| |||| || ||||| |||||
Sbjct 534 GCGAAGGCGACGAGGCGCTCGGCAAA 509
>seq66610
Length=5604
Score = 84.2 bits (92), Expect = 3e-11
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC 136772
||||||||||||||||||||||||||| |||||||||||||| | |||||||| ||
Sbjct 237 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCAGGTTCGAGACC 292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587326609523000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |