Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq205188 122 1e-22 seq12236 114 2e-20 seq222699 111 2e-19 seq217650 107 2e-18 seq64330 107 2e-18 seq15189 105 8e-18 seq177272 91.5 2e-13 seq88322 91.5 2e-13 seq58436 84.2 3e-11 seq25689 84.2 3e-11 >seq205188 Length=846 Score = 122 bits (134), Expect = 1e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 ||||||||||| || ||||| || ||||| || |||||| || ||||||||||| ||| Sbjct 1 TGGAGACCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCTGGCATGAGGCCC 60 Query 117346 CGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACAC 117405 || ||||| | ||| | || | ||| || |||||||||||||| ||||| || || Sbjct 61 CGTTTCTTGAGCCAGAAGATGGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCAACGCAG 120 Query 117406 GCAAACGCAAAAAGGCGCTCGGCGAAGGAG 117435 ||||| || | | |||||||||||||||| Sbjct 121 GCAAATGCGACGATGCGCTCGGCGAAGGAG 150 >seq12236 Length=17685 Score = 114 bits (126), Expect = 2e-20 Identities = 303/459 (66%), Gaps = 8/459 (2%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || || | | || || || || ||||||| || || || | | |||||| Sbjct 12101 TCAAGAATGTCTGCTCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 12042 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || || || | |||||||||| || | Sbjct 12041 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 11985 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | || |||| || |||||||| ||||||| |||||||| || Sbjct 11984 CCAATTCCAGTTCCTCTCTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 11925 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || || || ||| | | || | ||| ||||| | || || ||||||||| Sbjct 11924 GGGGCGTTCTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAACA 11865 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||| ||||| | | | | | |||| | || || ||| || |||||| || Sbjct 11864 AACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAATGGAACACCAGCTTCACCAGC 11806 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCG 9580 ||| || ||| | || ||||| || || ||||| ||| | || || | || Sbjct 11805 AATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCTTT 11746 Query 9581 TGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 || || || ||| || | | |||||||| | ||| ||||| ||||| | ||| Sbjct 11745 AGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACCTC 11686 Query 9641 TTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 || || | ||||| | || | ||| ||||||| Sbjct 11685 CATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 11647 Score = 114 bits (126), Expect = 2e-20 Identities = 303/459 (66%), Gaps = 8/459 (2%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || || | | || || || || ||||||| || || || | | |||||| Sbjct 15970 TCAAGAATGTCTGCTCTGTTAGTTGCTGCAATGACAATGATGCCAGTATTACCCTCAAAA 15911 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || || || | |||||||||| || | Sbjct 15910 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGCTCTCTTTCATCATTCCCT---CCA 15854 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | || |||| || |||||||| ||||||| |||||||| || Sbjct 15853 CCAATTCCAGTTCCTCTCTGTCTTCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 15794 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || || || ||| | | || | ||| ||||| | || || ||||||||| Sbjct 15793 GGGGCGTTCTCTTTGGCCTTCTTGAACAAATCACGAACTCGAGAAGCACCAACACCAACA 15734 Query 9462 AACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGC 9520 |||||||| ||||| | | | | | |||| | || || ||| || |||||| || Sbjct 15733 AACATCTCAACAAACTCAGAACCAG-ATATTGAAAAAAATGGAACACCAGCTTCACCAGC 15675 Query 9521 AATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCG 9580 ||| || ||| | || ||||| || || ||||| ||| | || || | || Sbjct 15674 AATAGCCTTGGCCAACAGGGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCTTT 15615 Query 9581 TGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 || || || ||| || | | |||||||| | ||| ||||| ||||| | ||| Sbjct 15614 AGGTATGCGAGCCCCAACAGCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACCTC 15555 Query 9641 TTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 || || | ||||| | || | ||| ||||||| Sbjct 15554 CATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATC 15516 >seq222699 Length=2956 Score = 111 bits (122), Expect = 2e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || || |||||||| || || ||||| || |||||| ||||| ||||| | || Sbjct 655 GTGAAGCCCTTCATCTCGCGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATCAAGCC 596 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | |||| | || | |||||| |||||||||||||| ||||| || || Sbjct 595 GCGCTTCTTTAGCCAAAATATCGAGCAGAAGCTGCCGGAGAAGAAGATTCCCTCGACGCA 536 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAG 117435 || || || | ||||||||||| |||||| Sbjct 535 GGCGAAGGCGACGAGGCGCTCGGCAAAGGAG 505 >seq217650 Length=1534 Score = 107 bits (118), Expect = 2e-18 Identities = 251/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9338 ||| ||||||||||| |||| ||| |||||||| || ||||||| ||||| || | | Sbjct 1178 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 1119 Query 9339 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 || | || || | | ||| | |||||||| ||||||||||||||||| ||||| Sbjct 1118 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 1061 Query 9399 CATGGT---TGATT-TTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCAC 9454 || ||| | ||| ||| || | ||||| | ||| | ||||| || || || Sbjct 1060 CACGGTGCCTTATTCTTC----GCCTTCTCAAACAAATCCCTCACCCTCGACGCACCAAC 1005 Query 9455 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9514 || ||||||| |||||| || | | || | || || || || ||| | ||| Sbjct 1004 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACACCCGCTTC 945 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 || || | || | || ||||| ||||| || || || || ||| | | || | | Sbjct 944 CCCAGCCACAGCCCTAGCCAGAAGCGTCTTCCCGGTTCCCGGTGGTCCCACCA-GAAGAC 886 Query 9575 ACCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633 ||||| | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 885 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 826 Query 9634 CAATCTCTTCCA 9645 ||| ||||| || Sbjct 825 CAACCTCTTGCA 814 >seq64330 Length=14123 Score = 107 bits (118), Expect = 2e-18 Identities = 251/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Plus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCT 9338 ||| ||||||||||| |||| ||| |||||||| || ||||||| ||||| || | | Sbjct 8587 AAACCCATCCATCTCCGTCAGAAGCTGGTTAATGGTCTGTTCCCTCTCATCGTTGCCACC 8646 Query 9339 GGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 || | || || | | ||| | |||||||| ||||||||||||||||| ||||| Sbjct 8647 TCCAAGC--CCCGCCCCTCTCTGCCTCCCCACGGCGTCAATCTCATCAATGAAAACAATG 8704 Query 9399 CATGGT---TGATT-TTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCAC 9454 || ||| | ||| ||| || | ||||| | ||| | ||||| || || || Sbjct 8705 CACGGTGCCTTATTCTTC----GCCTTCTCAAACAAATCCCTCACCCTCGACGCACCAAC 8760 Query 9455 ACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTC 9514 || ||||||| |||||| || | | || | || || || || ||| | ||| Sbjct 8761 CCCCACAAACAGCTCCACGAATTCCGAAGCCGCGCACGAGAAAAACGGCACACCCGCTTC 8820 Query 9515 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 9574 || || | || | || ||||| ||||| || || || || ||| | | || | | Sbjct 8821 CCCAGCCACAGCCCTAGCCAGAAGCGTCTTCCCGGTTCCCGGTGGTCCCACCA-GAAGAC 8879 Query 9575 ACCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCA 9633 ||||| | |||||||| || || || ||| | ||||| | ||| | |||||| | Sbjct 8880 ACCCCTTCGGAATCTTCGCACCCAGCGCAGTGTACTTATCAGGGTTCTTCAAAAAATCAA 8939 Query 9634 CAATCTCTTCCA 9645 ||| ||||| || Sbjct 8940 CAACCTCTTGCA 8951 >seq15189 Length=5727 Score = 105 bits (116), Expect = 8e-18 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 ||| ||||| ||||| || |||||||| || ||||| | ||| ||| ||||| | ||| Sbjct 1741 CTGTGGTCTAGGTGTTCCCGCATTGAAAAGAGTTGGAGATGCATGAGTGAACCACCGTTG 1682 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| || ||| || | | |||| |||||||||||| || || || | || Sbjct 1681 AGACATCAGGTGGTAAGTTTTGACAGCAGAGTCAATGTCTTCCTTATGAATTCCAACAGC 1622 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGAT 107345 || | ||| ||||||| ||| ||| |||||| | | || | || || || | || | Sbjct 1621 AACCCTCATCAACATGTGTTGTGGTCTTTCCACAACCTTACC-TTGAACCTTTAAGAGGT 1563 Query 107346 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCA 107380 || | ||| ||||||||||| |||||| ||| || Sbjct 1562 AGGACCTCTTAAGGGTTTTGAAACCAAAATAATCA 1528 >seq177272 Length=479 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 9224 ATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAA 9283 |||||| || ||| | | || || || || ||||||| ||||| || | | ||||| Sbjct 353 ATCAAGAATGTCAGCCCTGTTAGTAGCTGCAATGACAATGATACCGGTATTACCCTCAAA 412 Query 9284 ACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338 |||||||| ||||||||||||||||||| || ||||| | |||||||||| || Sbjct 413 TCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTCTGTTCTCTTTCATCATTCCCT 467 >seq88322 Length=2502 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 107227 || || || || || ||||||||||| || || || | |||||| ||||| | ||| Sbjct 908 TGAGGCCTAGGAGTTCCAGCATTGAAAAGAGTAGGAGATGCGTGGGTGAACCATCGTTGA 849 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 |||||| ||| ||| || | | |||| || ||||| ||| ||| || || | || Sbjct 848 GACATCATGTGGTAAGTTTTAACAGCAGAGTCTATGTCATCCTTGTGAATCCCAACCGCG 789 Query 107288 ACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--T 107345 || | ||| ||||||| ||| || |||||| | | || | || || || |||| | Sbjct 788 ACTCTCATCAACATGTGTTGCGGCCTTTCCA-CAACCTTCCCTTGAACC-TTCAAGAGGT 731 Query 107346 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 | | ||||||||||||||| ||||| ||| || | || |||||| Sbjct 730 AAGACCTCTCAAGGGTTTTGAACCCAAAATAATCATAGTCGAAGTCCC 683 >seq58436 Length=10304 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228 ||| |||||||||| | |||||||||||||||||||||||||| ||||| | ||| ||| Sbjct 9586 TATGGTGTAGTGGTTAGCACTTTGGACTTTGAATCCAACAACCTGGGTTCGACTCCCGGT 9645 Query 136229 AGGAGCTTT 136237 |||| |||| Sbjct 9646 AGGACCTTT 9654 >seq25689 Length=4009 Score = 84.2 bits (92), Expect = 3e-11 Identities = 190/283 (67%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 9359 TTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGC 9418 |||| |||| || |||||||| ||||||| || ||||| ||||| ||| || ||| Sbjct 4002 TTGCCTTCCAACAGCATCAATTTCATCAACAAAAACAATGCATGGAGCATTCTCTTTGGC 3943 Query 9419 GATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 9478 | | || | |||||| || | || || ||||||||||||||||||||||| | Sbjct 3942 CTTCTTGAATAAATCGCGGACTCGGGAAGCACCAACACCAACAAACATCTCCACAAACTC 3883 Query 9479 TGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | | | | |||| || || |||||| | |||||| ||||| || || | || Sbjct 3882 AGAACCTG-AGATTGAGAAAAATGGGACACCTGCTTCACCTGCAATAGCCTTTGCTAAAA 3824 Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCAC 9597 | ||||| || || || || ||| | || || |||| ||| || || ||| Sbjct 3823 GTGTCTTCCCAGTTCCAGGAGGACCAACAAGAAGAACACCTTTTGGTATGCGAGCCCCAA 3764 Query 9598 TTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 || | |||||||||| | || ||||| ||||| | ||| Sbjct 3763 CAGCAGTGAATCTCTCAGGCTTTTTAAGAAATTCCACCACCTC 3721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588328595643400