Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_015282.1
Length=174079
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 221 1e-52
seq95291 194 2e-44
seq13836 120 3e-22
seq78999 104 3e-17
seq76780 95.1 1e-14
>seq80997
Length=4773
Score = 221 bits (244), Expect = 1e-52
Identities = 301/414 (73%), Gaps = 6/414 (1%)
Strand=Plus/Plus
Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871
|| || || || |||| ||||| || ||| ||||||| ||||| | | | |||||
Sbjct 4363 AATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACTGCAACT 4422
Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930
||||| || || |||| || ||||||| || || || || || ||||||||||||||
Sbjct 4423 -TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 4481
Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990
|||||| | || || || | ||||| ||||| ||||| |||||||| || |||| |
Sbjct 4482 GCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATTCCTAC 4541
Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050
|| || || ||| | || || || || || |||||||| || || ||||||| ||
Sbjct 4542 TTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTG 4601
Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCG--GTATCTAT 164108
| | |||||||| ||||||| |||| | || | |||||| | | | ||| || |
Sbjct 4602 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-T 4660
Query 164109 GCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGT 164168
|| ||||||||||||||||||||||| || ||||| |||||||||||||||||| |
Sbjct 4661 GC-TACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCT 4719
Query 164169 GTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCT 164222
||||| || | || | |||| ||| || | | || ||| || ||||||||
Sbjct 4720 GTTGCATATTTAGCTCTTGTTGTAGCCGCTACTACTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 194 bits (214), Expect = 2e-44
Identities = 273/377 (72%), Gaps = 6/377 (2%)
Strand=Plus/Minus
Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTGCAGCAACC 163871
|| || || || |||| ||||| | ||| ||||||| ||||| | | | ||||
Sbjct 6034 AATCGTCTTTACATTGGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAAAT 5975
Query 163872 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTGA 163930
||||| || || |||| || ||||||| || || || || || ||||||||||||||
Sbjct 5974 -TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 5916
Query 163931 ACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 163990
| |||| | || || || | ||||| ||||| ||||| | |||||| || |||| |
Sbjct 5915 GCTTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTAC 5856
Query 163991 GTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAATG 164050
|| || || ||| | || || || || || |||||||| || || ||||||| ||
Sbjct 5855 TTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTG 5796
Query 164051 GCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTAT--CTAT 164108
| | |||||||| ||||||| |||| | || | |||||| | | ||| | || |
Sbjct 5795 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-T 5737
Query 164109 GCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGT 164168
|| ||||||||||||||||||||||| || ||||| |||||||||||||||||| |
Sbjct 5736 GC-TACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCT 5678
Query 164169 GTTGCTTACTCTGCACC 164185
||||| || || || ||
Sbjct 5677 GTTGCATATTCAGCTCC 5661
>seq13836
Length=10167
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 165473 GGGGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGTTTCATGCTT 165532
|| || || ||| ||||||| || |||||||| ||||||| |||| || |||||| |
Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529
Query 165533 CGTCAGTTTGAATTAGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTC 165591
||||| |||||| | || || ||| || | | || || || ||||| | || |||||
Sbjct 4530 CGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAACCGCATTCTC 4588
Query 165592 TGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTG 165651
||||| || |||||||||||| || || || || || || |||||||| || ||||
Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648
Query 165652 GTTTTTCGCTCCA 165664
||| || ||||||
Sbjct 4649 GTTCTTTGCTCCA 4661
>seq78999
Length=659
Score = 104 bits (114), Expect = 3e-17
Identities = 177/254 (70%), Gaps = 2/254 (1%)
Strand=Plus/Minus
Query 165938 AATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGT 165997
||||| | ||||| | || || |||| | ||||| || || | ||| | ||| | |
Sbjct 282 AATAAATGTTGGTTACGTT-CTGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATT 224
Query 165998 TCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAG 166057
| | || | || || | || || ||||| ||||||||||||||||| || ||||
Sbjct 223 ACTTTTGGGGTAGTTAGTTTGGCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAA 164
Query 166058 ATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAAT 166117
|| | | ||||||||| || | ||||| || |||||||| |||| ||| |||| ||
Sbjct 163 ATTCGTGGAGCAGAAGATCCTTA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAAC 105
Query 166118 GAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCT 166177
|||||| |||||| ||| ||| | ||| | | ||||| ||| || | ||| ||
Sbjct 104 GAAGGTATTCGTGGGTGGATGGGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCT 45
Query 166178 GAAGAAGTTCTGCC 166191
|||| ||||| ||
Sbjct 44 AAAGAGGTTCTACC 31
>seq76780
Length=5561
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 165335 GGGTTGGCAAGTTCCTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAGTTTCTACTCC 165393
|| ||||||||||| ||| | || || ||||| ||| | || || |||||||| |||||
Sbjct 417 GGCTTGGCAAGTTCTTATTTAGAAGGCTGCAA-CTTCTTAACCGCTGCAGTTTCCACTCC 359
Query 165394 AGCAGACGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTT 165453
|| | | | | || ||| | || | || ||||||||||| || || || ||||
Sbjct 358 CGCTAATAGTTTAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTT 299
Query 165454 CGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGC 165513
| | ||| || | || || || ||| ||||||| || ||||||| |||||||
Sbjct 298 TACCTGTTGGTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGG 239
Query 165514 TCTAATTGGTTTCATGCTTCGTCAGTTTGAA 165544
|||| ||||||||| | ||| | ||||||
Sbjct 238 ATTAATAGGTTTCATGTTACGTTAATTTGAA 208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555365166905400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |