Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 255 7e-63
seq95291 224 1e-53
seq13836 129 7e-25
seq78999 120 3e-22
seq76780 113 5e-20
>seq80997
Length=4773
Score = 255 bits (282), Expect = 7e-63
Identities = 322/440 (73%), Gaps = 2/440 (0%)
Strand=Plus/Plus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| || ||||| | |||||||| | || ||||| || | || ||||| || ||| |
Sbjct 4335 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4394
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||| ||||| || | | ||||| ||||| || || ||||| || ||| ||| |
Sbjct 4395 GATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4453
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| || || || ||| |||| || || | ||||| ||||
Sbjct 4454 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4513
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| ||||| |||||||| || ||||| ||||| ||||| ||| | || || ||||| |
Sbjct 4514 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4573
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
||||||||||||| | | || |||||||| ||||| || ||||||| |||| | |
Sbjct 4574 TCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTG 4633
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445
|| | |||||| | |||| | | ||| |||||||||||||||||||| || |
Sbjct 4634 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 4693
Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505
|||| ||||||||||| ||||| ||||||||| | |||| || | || || ||
Sbjct 4694 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTA 4753
Query 167506 CTGTATTCCTCGTCTATCCT 167525
|||| ||| | ||||||||
Sbjct 4754 CTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 224 bits (248), Expect = 1e-53
Identities = 293/403 (73%), Gaps = 2/403 (0%)
Strand=Plus/Minus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| || ||||| | |||| || | || ||||| || | || ||||| | ||| |
Sbjct 6062 CTTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTTGATGTTTT 6003
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||| ||||| || | | |||| ||||| || || ||||| || ||| ||| |
Sbjct 6002 GATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 5944
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| || || | ||| |||| || || | ||||| ||||
Sbjct 5943 CTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTATGGAAACA 5884
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| ||||| | |||||| || ||||| ||||| ||||| ||| | || || ||||| |
Sbjct 5883 ATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 5824
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
||||||||||||| | | || |||||||| ||||| || ||||||| |||| | |
Sbjct 5823 TCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTG 5764
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445
|| | |||||| | |||| | | ||| |||||||||||||||||||| || |
Sbjct 5763 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 5704
Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCC 167488
|||| ||||||||||| ||||| ||||||||| || |||||
Sbjct 5703 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661
>seq13836
Length=10167
Score = 129 bits (142), Expect = 7e-25
Identities = 152/203 (75%), Gaps = 2/203 (1%)
Strand=Plus/Plus
Query 168752 GTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGG 168811
|||||| | || || || ||| ||||||| || |||||||| ||||||| |||| ||
Sbjct 4460 GTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGG 4519
Query 168812 TTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTA 168870
|||||| | ||||| |||||||| || || ||| || | | || || || ||||| |
Sbjct 4520 GTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 4578
Query 168871 TTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTC 168930
|| ||||| ||||| || |||||||||||| || || || || || || |||||||
Sbjct 4579 CCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTC 4638
Query 168931 AATCGAGTTGGTTTTTCGCTCCA 168953
| || ||||||| || ||||||
Sbjct 4639 AGTCTGGTTGGTTCTTTGCTCCA 4661
>seq78999
Length=659
Score = 120 bits (132), Expect = 3e-22
Identities = 204/293 (70%), Gaps = 2/293 (1%)
Strand=Plus/Minus
Query 169188 AACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTC 169247
|| || || ||||| | |||||| |||| ||| ||||| | ||||| | || |
Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT-C 263
Query 169248 TTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTT 169307
| |||| | ||||| || || | ||| | ||| | | | | || | || || |
Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203
Query 169308 GCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCA 169367
|| || ||||| |||||||||||||||||||| |||| || | | ||||||||||||
Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143
Query 169368 GAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTA 169427
| |||||||| ||||||||||| | || |||| ||||||||| |||||| ||| |
Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84
Query 169428 GCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCC 169480
| | | ||| | | |||||| ||| || | ||| || | || || || ||
Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31
>seq76780
Length=5561
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 168624 GGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTTAGTACTCCA 168683
|| ||||||||||| ||| | || ||| ||||| | || || |||||| |||||
Sbjct 417 GGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTAACCGCTGCAGTTTCCACTCCC 358
Query 168684 GCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAAGGGGATTTC 168743
|| || | | | || ||| | || | || ||||||||||| ||||| || ||||
Sbjct 357 GCTAATAGTTTAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTT 298
Query 168744 GTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCT 168803
| | |||||||| | || || || ||| ||||||| || ||||||| |||||||
Sbjct 297 ACCTGTTGGTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGA 238
Query 168804 CTAATCGGTTTCATGCTTCGTCAGTTTGAACT 168835
|||| ||||||||| | ||| | ||||||||
Sbjct 237 TTAATAGGTTTCATGTTACGTTAATTTGAACT 206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559038052334000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |