Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq80997 255 7e-63 seq95291 224 1e-53 seq13836 129 7e-25 seq78999 120 3e-22 seq76780 113 5e-20 >seq80997 Length=4773 Score = 255 bits (282), Expect = 7e-63 Identities = 322/440 (73%), Gaps = 2/440 (0%) Strand=Plus/Plus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 ||| || ||||| | |||||||| | || ||||| || | || ||||| || ||| | Sbjct 4335 CTTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTT 4394 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||| ||||| || | | ||||| ||||| || || ||||| || ||| ||| | Sbjct 4395 GATGATTCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 4453 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 |||| || || || |||||||| || || || ||| |||| || || | ||||| |||| Sbjct 4454 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACA 4513 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | ||||| |||||||| || ||||| ||||| ||||| ||| | || || ||||| | Sbjct 4514 ATATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 4573 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 ||||||||||||| | | || |||||||| ||||| || ||||||| |||| | | Sbjct 4574 TCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTG 4633 Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445 || | |||||| | |||| | | ||| |||||||||||||||||||| || | Sbjct 4634 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 4693 Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505 |||| ||||||||||| ||||| ||||||||| | |||| || | || || || Sbjct 4694 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTA 4753 Query 167506 CTGTATTCCTCGTCTATCCT 167525 |||| ||| | |||||||| Sbjct 4754 CTGTTTTCTTGATCTATCCT 4773 >seq95291 Length=6073 Score = 224 bits (248), Expect = 1e-53 Identities = 293/403 (73%), Gaps = 2/403 (0%) Strand=Plus/Minus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 ||| || ||||| | |||| || | || ||||| || | || ||||| | ||| | Sbjct 6062 CTTCTGTAATTGGATAACCAACATCGAAAATCGTCTTTACATTGGATGGTTTGATGTTTT 6003 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||| ||||| || | | |||| ||||| || || ||||| || ||| ||| | Sbjct 6002 GATGATTCCTACTTTATTGACTGCAAAT-TCTGTATTTATTATCGCTTTTATCGCTGCCC 5944 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 |||| || || || |||||||| || || | ||| |||| || || | ||||| |||| Sbjct 5943 CTCCAGTAGATATTGATGGTATTCGTGAGCTTGTTTCTGGATCTCTACTTTATGGAAACA 5884 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | ||||| | |||||| || ||||| ||||| ||||| ||| | || || ||||| | Sbjct 5883 ATATCATTTTTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGA 5824 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 ||||||||||||| | | || |||||||| ||||| || ||||||| |||| | | Sbjct 5823 TCTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTG 5764 Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445 || | |||||| | |||| | | ||| |||||||||||||||||||| || | Sbjct 5763 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTC 5704 Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCC 167488 |||| ||||||||||| ||||| ||||||||| || ||||| Sbjct 5703 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCC 5661 >seq13836 Length=10167 Score = 129 bits (142), Expect = 7e-25 Identities = 152/203 (75%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 168752 GTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGG 168811 |||||| | || || || ||| ||||||| || |||||||| ||||||| |||| || Sbjct 4460 GTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGG 4519 Query 168812 TTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTA 168870 |||||| | ||||| |||||||| || || ||| || | | || || || ||||| | Sbjct 4520 GTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAA 4578 Query 168871 TTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTC 168930 || ||||| ||||| || |||||||||||| || || || || || || ||||||| Sbjct 4579 CCGCATTCTCAGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTC 4638 Query 168931 AATCGAGTTGGTTTTTCGCTCCA 168953 | || ||||||| || |||||| Sbjct 4639 AGTCTGGTTGGTTCTTTGCTCCA 4661 >seq78999 Length=659 Score = 120 bits (132), Expect = 3e-22 Identities = 204/293 (70%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 169188 AACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTC 169247 || || || ||||| | |||||| |||| ||| ||||| | ||||| | || | Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT-C 263 Query 169248 TTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTT 169307 | |||| | ||||| || || | ||| | ||| | | | | || | || || | Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203 Query 169308 GCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCA 169367 || || ||||| |||||||||||||||||||| |||| || | | |||||||||||| Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143 Query 169368 GAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTA 169427 | |||||||| ||||||||||| | || |||| ||||||||| |||||| ||| | Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84 Query 169428 GCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCC 169480 | | | ||| | | |||||| ||| || | ||| || | || || || || Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACC 31 >seq76780 Length=5561 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 168624 GGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTTAGTACTCCA 168683 || ||||||||||| ||| | || ||| ||||| | || || |||||| ||||| Sbjct 417 GGCTTGGCAAGTTCTTATTTAGAAGGCTGCAACTTCTTAACCGCTGCAGTTTCCACTCCC 358 Query 168684 GCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAAGGGGATTTC 168743 || || | | | || ||| | || | || ||||||||||| ||||| || |||| Sbjct 357 GCTAATAGTTTAGCACACTCTTTGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTT 298 Query 168744 GTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCT 168803 | | |||||||| | || || || ||| ||||||| || ||||||| ||||||| Sbjct 297 ACCTGTTGGTGTCAGTTAGGCGGTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGA 238 Query 168804 CTAATCGGTTTCATGCTTCGTCAGTTTGAACT 168835 |||| ||||||||| | ||| | |||||||| Sbjct 237 TTAATAGGTTTCATGTTACGTTAATTTGAACT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559038052334000