Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq80997 156 6e-33 seq95291 140 5e-28 >seq80997 Length=4773 Score = 156 bits (172), Expect = 6e-33 Identities = 257/371 (69%), Gaps = 0/371 (0%) Strand=Plus/Plus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 || || |||||| | ||| |||| ||||||||||| | ||||||||| | | | Sbjct 4357 ACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGACT 4416 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || || |||||||| ||||| || ||||| || || || Sbjct 4417 GCAACTTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATT 4476 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | ||||| ||||| ||||| |||||||| || | Sbjct 4477 CGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTATT 4536 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || || || || || || || || |||||||||||||| | ||||| Sbjct 4537 CCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGAT 4596 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 || ||| | ||||| || || |||| |||| || | | |||||| | ||||| | Sbjct 4597 GAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 4656 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | |||||| | |||||||| Sbjct 4657 GCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 4716 Query 215675 TGTGTTGCTTA 215685 |||||| || Sbjct 4717 GCTGTTGCATA 4727 >seq95291 Length=6073 Score = 140 bits (154), Expect = 5e-28 Identities = 257/377 (68%), Gaps = 0/377 (0%) Strand=Plus/Minus Query 215318 GACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCAGCT 215377 || |||||| | ||| |||| ||||||| ||| | ||||||||| | | | || Sbjct 6037 GAAAATCGTCTTTACATTGGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCA 5978 Query 215378 ACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATCAGA 215437 | || || || | || || |||||||| ||||| || ||||| || || || | Sbjct 5977 AATTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGT 5918 Query 215438 GAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCT 215497 |||| ||| |||| ||| || | ||||| ||||| ||||| | |||||| || | ||| Sbjct 5917 GAGCTTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCT 5858 Query 215498 AGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAA 215557 | ||| || || || || || || || || |||||||||||||| | ||||| || Sbjct 5857 ACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAG 5798 Query 215558 TGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATTTCT 215617 ||| | ||||| || || |||| |||| || | | |||||| | ||||| | || Sbjct 5797 TGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 5738 Query 215618 GCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGT 215677 ||| || | ||||||||||| || | | |||||| | |||||||| | Sbjct 5737 TGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCT 5678 Query 215678 GTTGCTTACTCCGCACC 215694 ||||| || || || || Sbjct 5677 GTTGCATATTCAGCTCC 5661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742995045546800