Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_015289.1
Length=176184
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 253 2e-62
seq95291 223 4e-53
seq13836 125 8e-24
seq78999 114 1e-20
seq76780 87.8 2e-12
>seq80997
Length=4773
Score = 253 bits (280), Expect = 2e-62
Identities = 309/419 (74%), Gaps = 2/419 (0%)
Strand=Plus/Plus
Query 164784 CACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGC 164843
|||| | || |||||||| | || ||||| |||||| | ||||| || ||| | |
Sbjct 4356 CACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGAC 4415
Query 164844 CGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTA 164902
|| || | ||| ||||||| || || |||||||| || || || || ||||||||||
Sbjct 4416 TGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTA 4474
Query 164903 TTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCG 164962
||||||| ||||| | || |||||| | || || ||||| ||||| |||||||| |
Sbjct 4475 TTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTA 4534
Query 164963 TTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGG 165022
|||| ||||| || || || | || || ||||| || |||||||| || | | |
Sbjct 4535 TTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTG 4594
Query 165023 ATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTG 165082
|||| ||||| |||||||| |||||||| | | |||| | |||||| | | ||||
Sbjct 4595 ATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTG 4654
Query 165083 TAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGA 165142
||||||||||||||||||||||||||||||| || || || ||||||||||||||||
Sbjct 4655 TAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGA 4714
Query 165143 TTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCT 165201
|| || |||||| || | ||| | || ||| | | |||||| || ||||||||
Sbjct 4715 TTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTACTGTTTTCTTGATCTATCCT 4773
>seq95291
Length=6073
Score = 223 bits (246), Expect = 4e-53
Identities = 271/367 (74%), Gaps = 2/367 (1%)
Strand=Plus/Minus
Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850
|| |||||||| | || ||||| | |||| | ||||| || ||| | | || | |
Sbjct 6034 AATCGTCTTTACATTGGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAA-A 5976
Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909
| ||| ||||||| || || |||||||| || || || || |||||||||||||||||
Sbjct 5975 TTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 5916
Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969
| ||| | || |||||| | || || ||||| ||||| | |||||| | |||| |
Sbjct 5915 GCTTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTAC 5856
Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029
|||| || || || | || || ||||| || |||||||| || | | ||||| ||
Sbjct 5855 TTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTG 5796
Query 165030 GTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTG 165089
||| |||||||| |||||||| | | |||| | |||||| | | |||||||||||
Sbjct 5795 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 5736
Query 165090 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGT 165149
|||||||||||||||||||||||| || || || |||||||||||||||||| ||
Sbjct 5735 CTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGT 5676
Query 165150 AGCATAT 165156
||||||
Sbjct 5675 TGCATAT 5669
>seq13836
Length=10167
Score = 125 bits (138), Expect = 8e-24
Identities = 145/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 166440 GGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTT 166499
|| || || ||| | ||||||||||||||||||||||| | |||| || |||||| |
Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529
Query 166500 CGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTC 166558
|| || |||||| | ||||| ||| || | || || || ||||||| ||| || ||
Sbjct 4530 CGTCAATTTGAACTTGCTCGATCT-GTTCAATTGCGACCTTATAATGCAACCGCATTCTC 4588
Query 166559 TGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTG 166618
||||| |||||||| || ||| ||| || || || || || |||||||| || ||||
Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648
Query 166619 GTTTTTCGCTCCA 166631
||| || ||||||
Sbjct 4649 GTTCTTTGCTCCA 4661
>seq78999
Length=659
Score = 114 bits (126), Expect = 1e-20
Identities = 214/312 (69%), Gaps = 2/312 (1%)
Strand=Plus/Minus
Query 166866 AACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTC 166925
|| |||| |||||| | ||||| |||| || ||||| | ||||| | || |
Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT-C 263
Query 166926 TTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTT 166985
| |||| | ||||| || || | ||| | ||| | | | | || | || || |
Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203
Query 166986 GCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCT 167045
|| || ||||| |||||||||||||||||||| ||||| | | | |||||| ||||||
Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143
Query 167046 GAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATG 167105
| ||||| || ||||| ||||| | ||| |||| || || ||||| ||| ||||||
Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84
Query 167106 GCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGT 167165
| | | ||| | | |||||| | | ||||| || |||||||||| || ||
Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACCACATGGA 24
Query 167166 AACGCTCTCTAA 167177
||| |||| |||
Sbjct 23 AACACTCTTTAA 12
>seq76780
Length=5561
Score = 87.8 bits (96), Expect = 2e-12
Identities = 133/188 (71%), Gaps = 1/188 (1%)
Strand=Plus/Minus
Query 166324 AGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTC 166383
||| ||||| ||| | || || |||||||| ||||| || || | | | || |||
Sbjct 394 AGGCTGCAA-CTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTT 336
Query 166384 TACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAG 166443
| | | || ||||||||||| || || || |||| | | ||||| || | || |
Sbjct 335 TGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTGTTGGTGTCAGTTAGGCG 276
Query 166444 GGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGC 166503
| || ||| | ||||||||| ||||||||||||| | |||| ||||||||| | ||
Sbjct 275 GTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTT 216
Query 166504 AGTTTGAA 166511
| ||||||
Sbjct 215 AATTTGAA 208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562082303158400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |