Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq80997 253 2e-62 seq95291 223 4e-53 seq13836 125 8e-24 seq78999 114 1e-20 seq76780 87.8 2e-12 >seq80997 Length=4773 Score = 253 bits (280), Expect = 2e-62 Identities = 309/419 (74%), Gaps = 2/419 (0%) Strand=Plus/Plus Query 164784 CACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGC 164843 |||| | || |||||||| | || ||||| |||||| | ||||| || ||| | | Sbjct 4356 CACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATTCCTACTTTATTGAC 4415 Query 164844 CGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTA 164902 || || | ||| ||||||| || || |||||||| || || || || |||||||||| Sbjct 4416 TGCAACT-TCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTA 4474 Query 164903 TTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCG 164962 ||||||| ||||| | || |||||| | || || ||||| ||||| |||||||| | Sbjct 4475 TTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCGATTA 4534 Query 164963 TTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGG 165022 |||| ||||| || || || | || || ||||| || |||||||| || | | | Sbjct 4535 TTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTG 4594 Query 165023 ATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTG 165082 |||| ||||| |||||||| |||||||| | | |||| | |||||| | | |||| Sbjct 4595 ATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTG 4654 Query 165083 TAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGA 165142 ||||||||||||||||||||||||||||||| || || || |||||||||||||||| Sbjct 4655 TAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGA 4714 Query 165143 TTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCT 165201 || || |||||| || | ||| | || ||| | | |||||| || |||||||| Sbjct 4715 TTGCTGTTGCATATTTAGCTCTTGTTGTAGCCGCTACTACTGTTTTCTTGATCTATCCT 4773 >seq95291 Length=6073 Score = 223 bits (246), Expect = 4e-53 Identities = 271/367 (74%), Gaps = 2/367 (1%) Strand=Plus/Minus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 || |||||||| | || ||||| | |||| | ||||| || ||| | | || | | Sbjct 6034 AATCGTCTTTACATTGGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCAA-A 5976 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| ||||||| || || |||||||| || || || || ||||||||||||||||| Sbjct 5975 TTCTGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 5916 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 | ||| | || |||||| | || || ||||| ||||| | |||||| | |||| | Sbjct 5915 GCTTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCCTAC 5856 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 |||| || || || | || || ||||| || |||||||| || | | ||||| || Sbjct 5855 TTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGAGTG 5796 Query 165030 GTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTG 165089 ||| |||||||| |||||||| | | |||| | |||||| | | ||||||||||| Sbjct 5795 GTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 5736 Query 165090 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGT 165149 |||||||||||||||||||||||| || || || |||||||||||||||||| || Sbjct 5735 CTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATTGCTGT 5676 Query 165150 AGCATAT 165156 |||||| Sbjct 5675 TGCATAT 5669 >seq13836 Length=10167 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 166440 GGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTT 166499 || || || ||| | ||||||||||||||||||||||| | |||| || |||||| | Sbjct 4470 GGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGATTAATAGGGTTCATGTTA 4529 Query 166500 CGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTC 166558 || || |||||| | ||||| ||| || | || || || ||||||| ||| || || Sbjct 4530 CGTCAATTTGAACTTGCTCGATCT-GTTCAATTGCGACCTTATAATGCAACCGCATTCTC 4588 Query 166559 TGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTG 166618 ||||| |||||||| || ||| ||| || || || || || |||||||| || |||| Sbjct 4589 AGGTCCAATTGCTGTTTTTGTTTTTGTATTCCTTATTTATCCACTGGGTCAGTCTGGTTG 4648 Query 166619 GTTTTTCGCTCCA 166631 ||| || |||||| Sbjct 4649 GTTCTTTGCTCCA 4661 >seq78999 Length=659 Score = 114 bits (126), Expect = 1e-20 Identities = 214/312 (69%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 166866 AACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTC 166925 || |||| |||||| | ||||| |||| || ||||| | ||||| | || | Sbjct 321 AATCGCTTTTGGTCATAAATCTTTAAGGTTGCTTTCTTCAATAAATGTTGGTTACGTT-C 263 Query 166926 TTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTT 166985 | |||| | ||||| || || | ||| | ||| | | | | || | || || | Sbjct 262 TGTATGTTATTTGTACCAGTAACTGGTTTACGGATCATTACTTTTGGGGTAGTTAGTTTG 203 Query 166986 GCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCT 167045 || || ||||| |||||||||||||||||||| ||||| | | | |||||| |||||| Sbjct 202 GCCCTAAACCTACGTGCTTATGACTTTGTTTCTAAAGAAATTCGTGGAGCAGAAGATCCT 143 Query 167046 GAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATG 167105 | ||||| || ||||| ||||| | ||| |||| || || ||||| ||| |||||| Sbjct 142 TA-TTTGAGACTTTCTACACCAAAAGTATTTTCTTAAACGAAGGTATTCGTGGGTGGATG 84 Query 167106 GCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGT 167165 | | | ||| | | |||||| | | ||||| || |||||||||| || || Sbjct 83 GGAGTTCAAGATTAGCTTCATGAAAACCTTATATTCGCTAAAGAGGTTCTACCACATGGA 24 Query 167166 AACGCTCTCTAA 167177 ||| |||| ||| Sbjct 23 AACACTCTTTAA 12 >seq76780 Length=5561 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/188 (71%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 166324 AGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTC 166383 ||| ||||| ||| | || || |||||||| ||||| || || | | | || ||| Sbjct 394 AGGCTGCAA-CTTCTTAACCGCTGCAGTTTCCACTCCCGCTAATAGTTTAGCACACTCTT 336 Query 166384 TACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAG 166443 | | | || ||||||||||| || || || |||| | | ||||| || | || | Sbjct 335 TGTTGATACTGTGGGGTCCTGAAGCACAGGGAAATTTTACCTGTTGGTGTCAGTTAGGCG 276 Query 166444 GGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGC 166503 | || ||| | ||||||||| ||||||||||||| | |||| ||||||||| | || Sbjct 275 GTCTGTGGACTTTTGTTGCTTTCCACGGTGCTTTCGGATTAATAGGTTTCATGTTACGTT 216 Query 166504 AGTTTGAA 166511 | |||||| Sbjct 215 AATTTGAA 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562082303158400