Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq80997 161 3e-35 seq95291 141 3e-29 >seq80997 Length=4773 Score = 161 bits (178), Expect = 3e-35 Identities = 277/396 (70%), Gaps = 6/396 (2%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || || ||||| || | |||||||| || || | Sbjct 4336 TTCTGTAATTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 4395 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || ||| | | || ||| | ||| ||||| | || || ||||| || || Sbjct 4396 ATGATTCCTACTTTATTGACTGCAACTTC-TGTATTTATTATCGCTTTTATCGCTGCCCC 4454 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || |||||||| ||||| || || || | || |||||||| Sbjct 4455 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 4514 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | |||||||| ||||| Sbjct 4515 TATCATTTCTGGTGCGATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTATCCGAT 4574 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 ||||||||| | | | || |||||| ||||||| ||||| || ||| |||| ||| | Sbjct 4575 CTGGGAAGCAGCTTCTGTTGATGAGTGGTTATACAACGGCGGTCCTTATGAACTAATTGT 4634 Query 26101 CTTCCACTTCTTAATAGGAGTAGC-AGC-ATATGCAGGGAGACAGTGGGAACTATCTTAC 26158 | ||||||||| | || ||||| || | ||| || | |||||||||| || Sbjct 4635 TCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGTCGTGAGTGGGAACTTAGTTTT 4692 Query 26159 AGACTAGGAATGAGACCATGGATATTTGTTGCATAT 26194 | || || ||| | || ||||| |||||||||| Sbjct 4693 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 4728 >seq95291 Length=6073 Score = 141 bits (156), Expect = 3e-29 Identities = 263/380 (69%), Gaps = 6/380 (2%) Strand=Plus/Minus Query 25826 GAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCCTGCTTACTCGCAGCC 25885 || || ||||| || | |||||||| | || | ||||| || ||| | | || Sbjct 6037 GAAAATCGTCTTTACATTGGATGGTTTGATGTTTTGATGATTCCTACTTTATTGACTGCA 5978 Query 25886 ACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGATATAGATGGCATACG 25944 | | | ||| ||||| | || || ||||| || || || |||||||| ||||| || || Sbjct 5977 AATTC-TGTATTTATTATCGCTTTTATCGCTGCCCCTCCAGTAGATATTGATGGTATTCG 5919 Query 25945 TGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCC 26004 ||||| ||||| || || || | || ||||||||||| || | || || | | || Sbjct 5918 TGAGCTTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTTTGGTGCGATTATTCC 5859 Query 26005 CTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGCTGGCACACTGGACGA 26064 | ||| || || || | |||||||| |||||||||||||| | | | || || Sbjct 5858 TACTTCTGCGGCTATAGGTTTGCATTTTTATCCGATCTGGGAAGCAGCTTCTGTTGATGA 5799 Query 26065 GTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGC 26124 |||| ||||||| ||||| || ||| |||| ||| | | ||||||||| | || ||||| Sbjct 5798 GTGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGC 5739 Query 26125 -AGC-ATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAATGAGACCATGGATA 26182 || | ||| || | |||||||||| || | || || ||| | || ||||| Sbjct 5738 TTGCTACATG--GGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGTCCTTGGATT 5681 Query 26183 TTTGTTGCATATACAGCACC 26202 |||||||||| |||| || Sbjct 5680 GCTGTTGCATATTCAGCTCC 5661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146336046792840