Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_018848.1
Length=37612
Score E
Sequences producing significant alignments: (Bits) Value
seq21506 91.5 4e-14
>seq21506
Length=5703
Score = 91.5 bits (100), Expect = 4e-14
Identities = 147/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 30196 GTGGGCAACGTCGTTGCCGACCCCGAACTCAGGTTCACCCCCGCCGGCGCCGCC-GTCGC 30254
||||||||| || ||||||||||| || | | ||| | ||| || ||| || ||
Sbjct 5338 GTGGGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGG-GCTGCCGGTGGC 5280
Query 30255 GAACTTCCGGCTCGCCTCGACCCCCCGCACGTTCGACCGCACCGCCAACGAATGGCGAGA 30314
||||||| |||| ||||| || |||| |||||||| |||| ||||| ||| ||
Sbjct 5279 GAACTTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCGCGAACGAGTGGAAGGA 5220
Query 30315 CGGCGAGACCCTGTTCCTGTCCGTCTCCGTATGGCGCCAGCAGGCCGAGAACGTCGCCGG 30374
|||||| | |||||||| || ||| || ||||| || |||||| |||| || ||
Sbjct 5219 CGGCGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGGG 5160
Query 30375 ATCCATCCACCGCGGCGACCGCGTGATCG 30403
|| || | ||| ||||||||||
Sbjct 5159 CTCGCTCACCAAGGGCATGCGCGTGATCG 5131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119916920138580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |