Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_018848.1 Length=37612 Score E Sequences producing significant alignments: (Bits) Value seq21506 91.5 4e-14 >seq21506 Length=5703 Score = 91.5 bits (100), Expect = 4e-14 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 30196 GTGGGCAACGTCGTTGCCGACCCCGAACTCAGGTTCACCCCCGCCGGCGCCGCC-GTCGC 30254 ||||||||| || ||||||||||| || | | ||| | ||| || ||| || || Sbjct 5338 GTGGGCAACCTCACCGCCGACCCCGAGCTGCGCTACACGCAGAACGG-GCTGCCGGTGGC 5280 Query 30255 GAACTTCCGGCTCGCCTCGACCCCCCGCACGTTCGACCGCACCGCCAACGAATGGCGAGA 30314 ||||||| |||| ||||| || |||| |||||||| |||| ||||| ||| || Sbjct 5279 GAACTTCACCATCGCATCGACGCCTCGCAACTTCGACCGTGCCGCGAACGAGTGGAAGGA 5220 Query 30315 CGGCGAGACCCTGTTCCTGTCCGTCTCCGTATGGCGCCAGCAGGCCGAGAACGTCGCCGG 30374 |||||| | |||||||| || ||| || ||||| || |||||| |||| || || Sbjct 5219 CGGCGAAGCGCTGTTCCTCCGCGCCTCGGTGTGGCGTGAGTTCGCCGAGCACGTGGCGGG 5160 Query 30375 ATCCATCCACCGCGGCGACCGCGTGATCG 30403 || || | ||| |||||||||| Sbjct 5159 CTCGCTCACCAAGGGCATGCGCGTGATCG 5131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119916920138580