Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq205188 163 5e-35
>seq205188
Length=846
Score = 163 bits (180), Expect = 5e-35
Identities = 365/537 (68%), Gaps = 11/537 (2%)
Strand=Plus/Plus
Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211
|| ||||| ||| |||||| ||||||||||| ||| || ||||||| |||| |
Sbjct 7 CCCTCGTCGCGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCTGGCATGAGGCCCCGTTTC 66
Query 48212 TTGAGCCAGAAAATTGCCGCGAAAG-AGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270
||||||||||| | || || |||| || ||||||||||| ||||| || || ||
Sbjct 67 TTGAGCCAGAAGA-TGGAGCAAAAGCTTCCGGAGAAGAAGATTCCCTCAACGCAGGCAAA 125
Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330
||| || | ||| |||| || || ||| ||||||| || |||||||
Sbjct 126 TGCGACGATGCGCTCGGCGAAGGAGTCGGAAGAGTC---GATCCAGCGGAGGGCCCAGTT 182
Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG-CTTCTTGCACTCAC 48389
|||||||| ||| || || || || || ||||| | ||||| | ||| |||
Sbjct 183 GGCCTTCTTGGTGACACAGGGAATGGTGTCAATGGCGTGAAAGAGACGGCTT-TTCTCTA 241
Query 48390 CTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTA 48449
| | ||| | ||||| ||| || ||||||||| ||||| | ||||| |
Sbjct 242 CGGAGTCTTTTATGTAGGTTTCGAGGAGGAGGCTGTACATCTCGGAGTGAATGTTCTCGA 301
Query 48450 TAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATC 48509
| ||||||||||| ||||| ||||| | |||||| | ||||| || || | | ||
Sbjct 302 TGGCGATCTGGAAGCCGTAAAAGGCGCGGGCCTCGGAGACCTGGACCTC-CTTCATAAAA 360
Query 48510 TCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGT 48568
|| || || || || || || || || || || || |||||||||||||| ||
Sbjct 361 CGGCCGGCGAGGTTTTCGAGTACGATGCCGTCGGAGGCGGCGAAGAAGGCAAGGACGTGG 420
Query 48569 TTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCC-AGCCCTGTACGTCTTTGCCCAG 48627
| | ||||||||||||| || |||||||| |||| | ||| | ||| | ||
Sbjct 421 GTGATGAAATGGCGCTCGCCGTCGGTGAGAGTGTTCCAATGGCTG-ATGTCCTGAGAGAG 479
Query 48628 GTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
|| || || ||| | |||||||| || || |||||| |||||||| |||| ||
Sbjct 480 ATCGACCTCCTCCGCCGTCCAGAACGAGGCTTCTGCTTTCTTGTACATTTCCCAGAT 536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928924100614400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |