Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687 525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq222699 136 7e-27 seq205188 132 9e-26 >seq222699 Length=2956 Score = 136 bits (150), Expect = 7e-27 Identities = 375/563 (67%), Gaps = 15/563 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || ||| |||||||||||||||| ||||||| Sbjct 119 ATTTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGATCTT 178 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 || | ||| | | |||| || | || || | | ||||| | || ||| || Sbjct 179 TCCCAAGACCTCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCTACTTCATCACCCAC 238 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || | || |||||||| ||||| || || || || ||| || || || | ||| Sbjct 239 GTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGCCGCCCGCTTC 298 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATCGA 25715 | | |||| | || || |||||| ||| ||||||||| |||||||| |||||||| Sbjct 299 ATGAAGGAAATCCAAGCCGCCGAGGCC-CGTGCTTTCTACGGCTTCCAGATCGCCATCGA 357 Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCGC 25772 || | ||||| ||| |||| || || || || || ||||| | |||| | | Sbjct 358 GAACATCCACTCCGAGATGTA---CAGTCTCCTCTTGGAAACCTACATCAAAGACTCCAC 414 Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832 ||| | ||| ||||| | ||| | || ||| ||| | || | |||||| | Sbjct 415 CGAAAAGAATCACCTGTTCCGCGCCGTAGATACCATCCCCTGTGTCGCCAAGAAGGCCCA 474 Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||| || |||||| | ||| | || | |||| |||||| || || ||||| Sbjct 475 ATGGGCCTTGCGCTGGATCGA-TGCC--ACCGACTCCTTTGCCGAGCGCCTCGTCGCCTT 531 Query 25893 TG-CTGCTGTGGAGGGCATCTTTTTCAGCGG-TTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 | |||| || ||||| ||||| ||| ||| | | ||| | || || ||||| ||| Sbjct 532 CGCCTGC-GTCGAGGGAATCTTCTTCTCCGGCAGCTTCTGC-TCGATATTTTGGCTAAAG 589 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || |||||||| || ||| |||||||| ||||| | || || || Sbjct 590 AAGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAACGAACTCATATCGCGAGATGAAGGG 649 Query 26011 CTCCACAGAGATTTTGCCTGCCT 26033 || ||| | || || || ||||| Sbjct 650 CTTCACTGCGACTTCGCGTGCCT 672 >seq205188 Length=846 Score = 132 bits (146), Expect = 9e-26 Identities = 362/543 (67%), Gaps = 11/543 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || ||| |||||| || || ||| | ||||| Sbjct 536 ATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTTCTGGACGGCGGAGGAGGTCGATCTC 477 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | ||||||| | ||| || |||| || | | ||||| ||||| ||| || Sbjct 476 TCTCAGGACATCAGCCATTGGAACACTCTCACCGACGGCGAGCGCCATTTCATCACCCAC 417 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || | || ||||| || ||||| || || || || ||| || || || | || Sbjct 416 GTCCTTGCCTTCTTCGCCGCCTCCGACGGCATCGTACTCGAAAACCTCGCCGGCCGTTTT 357 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAA 25716 | | ||| || ||| | |||||| || ||||| |||||||| |||||||| Sbjct 356 ATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGCCTTTTACGGCTTCCAGATCGCCATCGAG 297 Query 25717 AATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGAG 25776 || | ||||| ||| |||| | || || || ||||| | |||| || ||| Sbjct 296 AACATTCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATAAAAGACTCCGTAGAG 237 Query 25777 AGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGG 25836 | | || || ||| ||||| || ||| ||| | ||| | |||||| ||| Sbjct 236 AAAAGCCGTCTCTTTCACGCCATTGACACCATTCCCTGTGTCACCAAGAAGGCCAACTGG 177 Query 25837 GCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGC 25895 ||| | |||||| || | || || | || | |||||| | || || ||||| Sbjct 176 GCCCTCCGCTGGATCGACTCTTCCGA---CTCC-TTCGCCGAGCGCATCGTCGCATTTGC 121 Query 25896 -TGCTGTGGAGGGCATCTTTTTCAGCGGTT-CGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 ||| || ||||| ||||| ||| ||| | ||||| ||||||||||||||||| | Sbjct 120 CTGC-GTTGAGGGAATCTTCTTCTCCGGAAGCTTTTGCT-CCATCTTCTGGCTCAAGAA- 64 Query 25954 AAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | |||| | |||||| || || ||| |||||||| |||||| | | ||||||||||| Sbjct 63 ACGGGGCCTCATGCCAGGACTCACCTTCTCCAACGAACTCATCTCCCGCGACGAGGGTCT 4 Query 26013 CCA 26015 ||| Sbjct 3 CCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926243628190400