Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq222699 136 7e-27
seq205188 132 9e-26
>seq222699
Length=2956
Score = 136 bits (150), Expect = 7e-27
Identities = 375/563 (67%), Gaps = 15/563 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||||| ||||||||||| || || ||| |||||||||||||||| |||||||
Sbjct 119 ATTTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGATCTT 178
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596
|| | ||| | | |||| || | || || | | ||||| | || ||| ||
Sbjct 179 TCCCAAGACCTCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCTACTTCATCACCCAC 238
Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656
|| | || |||||||| ||||| || || || || ||| || || || | |||
Sbjct 239 GTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTTCTCGAAAACCTCGCCGCCCGCTTC 298
Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATCGA 25715
| | |||| | || || |||||| ||| ||||||||| |||||||| ||||||||
Sbjct 299 ATGAAGGAAATCCAAGCCGCCGAGGCC-CGTGCTTTCTACGGCTTCCAGATCGCCATCGA 357
Query 25716 AAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCGC 25772
|| | ||||| ||| |||| || || || || || ||||| | |||| | |
Sbjct 358 GAACATCCACTCCGAGATGTA---CAGTCTCCTCTTGGAAACCTACATCAAAGACTCCAC 414
Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832
||| | ||| ||||| | ||| | || ||| ||| | || | |||||| |
Sbjct 415 CGAAAAGAATCACCTGTTCCGCGCCGTAGATACCATCCCCTGTGTCGCCAAGAAGGCCCA 474
Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892
|||||| || |||||| | ||| | || | |||| |||||| || || |||||
Sbjct 475 ATGGGCCTTGCGCTGGATCGA-TGCC--ACCGACTCCTTTGCCGAGCGCCTCGTCGCCTT 531
Query 25893 TG-CTGCTGTGGAGGGCATCTTTTTCAGCGG-TTCGTTTGCGGCCATCTTCTGGCTCAAG 25950
| |||| || ||||| ||||| ||| ||| | | ||| | || || ||||| |||
Sbjct 532 CGCCTGC-GTCGAGGGAATCTTCTTCTCCGGCAGCTTCTGC-TCGATATTTTGGCTAAAG 589
Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010
|| || |||||||| || ||| |||||||| ||||| | || || ||
Sbjct 590 AAGCGCGGCTTGATGCCCGGCCTCACCTTCTCCAACGAACTCATATCGCGAGATGAAGGG 649
Query 26011 CTCCACAGAGATTTTGCCTGCCT 26033
|| ||| | || || || |||||
Sbjct 650 CTTCACTGCGACTTCGCGTGCCT 672
>seq205188
Length=846
Score = 132 bits (146), Expect = 9e-26
Identities = 362/543 (67%), Gaps = 11/543 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||||| ||||||||||| || || ||| |||||| || || ||| | |||||
Sbjct 536 ATCTGGGAAATGTACAAGAAAGCAGAAGCCTCGTTCTGGACGGCGGAGGAGGTCGATCTC 477
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596
| ||||||| | ||| || |||| || | | ||||| ||||| ||| ||
Sbjct 476 TCTCAGGACATCAGCCATTGGAACACTCTCACCGACGGCGAGCGCCATTTCATCACCCAC 417
Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656
|| | || ||||| || ||||| || || || || ||| || || || | ||
Sbjct 416 GTCCTTGCCTTCTTCGCCGCCTCCGACGGCATCGTACTCGAAAACCTCGCCGGCCGTTTT 357
Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAA 25716
| | ||| || ||| | |||||| || ||||| |||||||| ||||||||
Sbjct 356 ATGAAGGAGGTCCAGGTCTCCGAGGCCCGCGCCTTTTACGGCTTCCAGATCGCCATCGAG 297
Query 25717 AATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGAG 25776
|| | ||||| ||| |||| | || || || ||||| | |||| || |||
Sbjct 296 AACATTCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATAAAAGACTCCGTAGAG 237
Query 25777 AGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGG 25836
| | || || ||| ||||| || ||| ||| | ||| | |||||| |||
Sbjct 236 AAAAGCCGTCTCTTTCACGCCATTGACACCATTCCCTGTGTCACCAAGAAGGCCAACTGG 177
Query 25837 GCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGC 25895
||| | |||||| || | || || | || | |||||| | || || |||||
Sbjct 176 GCCCTCCGCTGGATCGACTCTTCCGA---CTCC-TTCGCCGAGCGCATCGTCGCATTTGC 121
Query 25896 -TGCTGTGGAGGGCATCTTTTTCAGCGGTT-CGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953
||| || ||||| ||||| ||| ||| | ||||| ||||||||||||||||| |
Sbjct 120 CTGC-GTTGAGGGAATCTTCTTCTCCGGAAGCTTTTGCT-CCATCTTCTGGCTCAAGAA- 64
Query 25954 AAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012
| |||| | |||||| || || ||| |||||||| |||||| | | |||||||||||
Sbjct 63 ACGGGGCCTCATGCCAGGACTCACCTTCTCCAACGAACTCATCTCCCGCGACGAGGGTCT 4
Query 26013 CCA 26015
|||
Sbjct 3 CCA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 926243628190400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |