Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vigna_20unguiculata_20subsp._20unguiculata_20[genbank_20GCA_5F001687
525.1_202016-07-20] 224,035 sequences; 695,045,594 total letters
Query= NC_020837.1
Length=198013
Score E
Sequences producing significant alignments: (Bits) Value
seq80997 196 6e-45
seq95291 172 7e-38
seq13836 111 2e-19
seq78999 102 1e-16
seq221580 87.8 2e-12
>seq80997
Length=4773
Score = 196 bits (216), Expect = 6e-45
Identities = 295/413 (71%), Gaps = 6/413 (1%)
Strand=Plus/Minus
Query 103721 GGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGCGACACAGATC 103780
|| |||| |||||| || | | || || ||||| |||| | ||||| ||| |||
Sbjct 4772 GGATAGATCAAGAAAACAGTAGTAGCGGCTACAACAAGAGCTAAATATGCAACAGCAATC 4713
Query 103781 CAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATATATGCATAGATG 103840
|| || ||||| |||||||| | | |||||||||||| ||||| || ||| || |
Sbjct 4712 CAAGGACGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTA-GCA-AGCTA 4655
Query 103841 C--CAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACAGCCACTCAT 103898
| ||| | |||||| | || | |||| ||||||| ||||| || | ||||||||
Sbjct 4654 CACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCACTCAT 4595
Query 103899 CAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGGAGGAGGGAA 103958
||| ||| ||||||||||| || ||||| || || | ||| || || || | ||||
Sbjct 4594 CAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCAAACCTATAGCCGCAGAAGTAGGAA 4535
Query 103959 CAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGGGTTCACGAA 104018
|| |||||||| ||||| ||||| || || | || || |||| || || |||||||
Sbjct 4534 TAATCGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGCTCACGAA 4475
Query 104019 TGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAGATGGTTGCC 104077
| || || ||||| || ||||| || || | ||||| | || || |||| |||||
Sbjct 4474 TACCATCAATATCTACTGGAGGGGCAGCGATAAAAGCGATAATAAATACAGA-AGTTGCA 4416
Query 104078 GCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGGTT 104130
| ||| | ||| || ||||||| ||||| ||||| |||| || ||||| ||
Sbjct 4415 GTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGATT 4363
>seq95291
Length=6073
Score = 172 bits (190), Expect = 7e-38
Identities = 292/414 (71%), Gaps = 8/414 (2%)
Strand=Plus/Plus
Query 103757 GGAGCAGAGTATGCGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCAC 103816
||||| || ||||| ||| ||||| || ||||| |||||||| | | |||||||
Sbjct 5661 GGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGAAAACTAAGTTCCCAC 5720
Query 103817 TCACGTCCCATATATGCATAG--ATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAG 103874
||||| ||||| || ||| || | |||| | |||||| | || | |||| |||
Sbjct 5721 TCACGACCCATGTA-GCA-AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAG 5778
Query 103875 GACCACCGTTATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAA 103934
|||| ||||| || | ||||||||||| ||| ||||||||||| || ||||| || || |
Sbjct 5779 GACCGCCGTTGTATAACCACTCATCAACAGAAGCTGCTTCCCAGATCGGATAAAAATGCA 5838
Query 103935 GACCAATTGCGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGA 103994
||| || || || | |||| || |||||| | ||||| ||||| || || | |
Sbjct 5839 AACCTATAGCCGCAGAAGTAGGAATAATCGCACCAAAAATGATATTGTTTCCATAAAGTA 5898
Query 103995 GTGAACCAGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAG 104054
| || |||| || | |||||||| || || ||||| || ||||| || || | ||||
Sbjct 5899 GAGATCCAGAAACAAGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATAAAAG 5958
Query 104055 CAACGATGAA-GCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAA 104113
| | || || |||| |||| | ||| | ||| || ||||||| ||| | |||||
Sbjct 5959 CGATAATAAATACAGA-ATTTGCAGTCAATAAAGTAGGAATCATCAAAACATCAAACCAT 6017
Query 104114 CCAACATAGAGACGGTTGTTTGTCGAT-GTAACCCACTCGCAGAAGTTATCCCA 104166
|||| || ||||| || || | | | || | ||| | ||||||| | ||||
Sbjct 6018 CCAATGTAAAGACGATT-TTCGATGTTGGTTATCCAATTACAGAAGTGACCCCA 6070
>seq13836
Length=10167
Score = 111 bits (122), Expect = 2e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 102253 GGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAAACA 102312
|| ||||||||||||| ||||| || || ||||| || || || ||| |||||||||
Sbjct 4660 GGAGCAAAGAACCAACCAGACTGACCCAGTGGATAAATAAGGAATACAAAAACAAAAACA 4601
Query 102313 GCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCCAAC 102372
|| || || || ||||| || | ||||| || || || | | || | | ||| |
Sbjct 4600 GCAATTGGACCTGAGAATGCGGTTGCATTATAAGGTCGCAATTGAACAGATCGAGCAAGT 4541
Query 102373 TCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAAGCC 102432
|| |||||||| | |||||| || || | | || |||||||||||||| ||||||| |
Sbjct 4540 TCAAATTGACGTAACATGAACCCTATTAATCCGAAAGCACCGTGGAGAGCAACAAAAGTC 4481
Query 102433 CAGAGTCCCCC 102443
|| || || ||
Sbjct 4480 CACAGACCGCC 4470
>seq78999
Length=659
Score = 102 bits (112), Expect = 1e-16
Identities = 209/308 (68%), Gaps = 2/308 (1%)
Strand=Plus/Plus
Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769
|||| ||| || ||| | ||||||| || |||| || ||||||||| | | |||
Sbjct 16 AGAGTGTTTCCATGTGGTAGAACCTCTTTAGCGAATATAAGGTTTTCATGAAGCTAATCT 75
Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829
| ||| ||| |||| | |||||| || || | || | || |||||||| |||
Sbjct 76 TGAACTCCCATCCACCCACGAATACCTTCGTTTAAGAAAATACTTTTGGTGTAGAAAGTC 135
Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889
|| || | |||||||||||| | | || |||| || ||||||||||||||||| |||
Sbjct 136 TCAAA-TAAGGATCTTCTGCTCCACGAATTTCTTTAGAAACAAAGTCATAAGCACGTAGG 194
Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949
|| || || | || || | || | | | | ||| | ||| | || || |||||
Sbjct 195 TTTAGGGCCAAACTAACTACCCCAAAAGTAATGATCCGTAAACCAGTTACTGGTACAAAT 254
Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009
| |||| || || | ||||| | ||||| || |||| |||||||| |||||
Sbjct 255 AACATACAG-AACGTAACCAACATTTATTGAAGAAAGCAACCTTAAAGATTTATGACCAA 313
Query 102010 AAACGGTT 102017
|| || ||
Sbjct 314 AAGCGATT 321
>seq221580
Length=2368
Score = 87.8 bits (96), Expect = 2e-12
Identities = 133/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 102814 ATCCGAAGTTGGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCGTCATC 102873
||| || || ||||||| || || || |||| ||||| |||| || | || ||
Sbjct 1770 ATCTGATGTCGGGTATGAGACACATGTGAGAAGGTAACCTTTCTCTATCTGCTGTTCTTC 1711
Query 102874 CAGAAAGGATTGATCTTCTTGATCTACAGTACCCGATTCAA-TCTTACCAGCACAAGTAG 102932
||||| ||||||||| ||||| |||| ||| || || | |||| |||||||||||||
Sbjct 1710 AAGAAAAGATTGATCTGACTGATCCACAGCACCTGAATCCAGTCTT-CCAGCACAAGTAG 1652
Query 102933 AACACGCACCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCGTCTA 102992
| || || ||||| | || || || || || || | || || || ||||| | || |
Sbjct 1651 AGCATGCTCCAGCTCTGCATGAGTATGGTAGTTCCAATCCAGCCTCTTCAGCTGAATCCA 1592
Query 102993 GAATATA 102999
|||| ||
Sbjct 1591 GAATGTA 1585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631739484757800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |